Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 6cre.1
Dehaloperoxidase B in complex with 5-Br-ortho-guaiacol
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.58 Å
Oligo State
homo-dimer
Ligands
2 x
HEM
:
PROTOPORPHYRIN IX CONTAINING FE
(Non-covalent)
HEM.1:
19 residues within 4Å:
Chain A:
F.24
,
E.31
,
N.34
,
F.35
,
H.55
,
K.58
,
V.59
,
L.62
,
M.63
,
L.83
,
M.86
,
Q.88
,
H.89
,
L.92
,
N.96
,
F.97
,
L.100
,
L.127
Ligands:
F9G.3
19
PLIP interactions
:
18 interactions with chain A
,
1 Ligand-Water interactions
,
Hydrophobic interactions:
A:F.24
,
A:F.35
,
A:V.59
,
A:L.62
,
A:L.62
,
A:M.63
,
A:L.83
,
A:Q.88
,
A:L.92
,
A:N.96
,
A:F.97
,
A:F.97
,
A:L.100
,
A:L.127
Hydrogen bonds:
A:H.55
Salt bridges:
A:H.55
,
A:K.58
Metal complexes:
A:H.89
,
H
2
O.1
HEM.4:
14 residues within 4Å:
Chain B:
F.24
,
E.31
,
N.34
,
F.35
,
H.55
,
V.59
,
L.62
,
L.83
,
M.86
,
Q.88
,
H.89
,
L.92
,
N.96
,
F.97
15
PLIP interactions
:
15 interactions with chain B
,
Hydrophobic interactions:
B:F.24
,
B:F.35
,
B:F.35
,
B:V.59
,
B:V.59
,
B:L.62
,
B:L.62
,
B:L.83
,
B:Q.88
,
B:L.92
,
B:N.96
Water bridges:
B:K.51
pi-Stacking:
B:H.89
Metal complexes:
B:H.55
,
B:H.89
2 x
SO4
:
SULFATE ION
(Non-functional Binders)
SO4.2:
3 residues within 4Å:
Chain A:
K.32
,
V.39
,
G.40
4
PLIP interactions
:
4 interactions with chain A
Hydrogen bonds:
A:G.40
,
A:K.41
Water bridges:
A:K.41
Salt bridges:
A:K.32
SO4.5:
3 residues within 4Å:
Chain B:
K.32
,
V.39
,
G.40
6
PLIP interactions
:
6 interactions with chain B
Hydrogen bonds:
B:G.40
Water bridges:
B:K.32
,
B:K.32
,
B:K.41
,
B:K.41
Salt bridges:
B:K.32
1 x
F9G
:
5-bromo-2-methoxyphenol
(Non-covalent)
F9G.3:
10 residues within 4Å:
Chain A:
A.17
,
F.21
,
F.24
,
F.35
,
H.55
,
T.56
,
V.59
,
F.60
,
L.100
Ligands:
HEM.1
4
PLIP interactions
:
4 interactions with chain A
Hydrophobic interactions:
A:F.60
,
A:L.100
Hydrogen bonds:
A:H.55
pi-Stacking:
A:F.21
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
McGuire, A.H. et al., Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase. Biochemistry (2018)
Release Date
2019-03-20
Peptides
Dehaloperoxidase B:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
Dehaloperoxidase B
Toggle Identical (AB)
Related Entries With Identical Sequence
3ixf.1
|
3ixf.2
|
5chq.1
|
5chq.2
|
5chr.1
|
5chr.2
|
5k1l.1
|
5lk9.1
|
5lkv.1
|
5llz.1
|
5v5j.1
|
6ch5.1
|
6ch5.2
|
6ch6.1
|
6ch6.2
|
6cke.1
|
6co5.1
|
6co5.2
|
6i6g.1
|
6i7f.1
|
6ong.1
|
6ong.2
|
6onk.1
|
6onk.2
|
6onr.1
|
6onr.2
|
6onx.1
|
6onx.2
|
6onz.1
|
6onz.2
more...
less...
6oo1.1
|
6oo1.2
|
6oo6.1
|
6oo6.2
|
6oo8.1
|
6oo8.2
|
6vd3.1
|
6vd3.2
|
6vd4.1
|
6vd4.2
|
6vd5.1
|
6vd5.2
|
6vd6.1
|
6vd6.2
|
6vdr.1
|
6vdr.2
|
6vds.1
|
6vds.2
|
6vdt.1
|
6vdt.2
|
6vdu.1
|
6vdu.2
|
6vdv.1
|
6vdv.2
|
6vdw.1
|
6vdw.2
|
6vdx.1
|
6vdx.2
|
6vdy.1
|
6vdy.2
|
7jor.1
|
7jor.2
|
7kcu.1
|
7kcu.2
|
7kfm.1
|
7lzk.1
|
7lzk.2
|
7lzn.1
|
7lzn.2
|
7lzo.1
|
7lzo.2
|
7m0f.1
|
7m0f.2
|
7m0h.1
|
7m0h.2
|
7m1i.1
|
7m1i.2
|
7m1j.1
|
7m1j.2
|
7m1k.1
|
7m1k.2
|
7sjb.1
|
7sjb.2
|
7sjc.1
|
7sjc.2
|
7sjd.1
|
7sjd.2
|
7sje.1
|
7sje.2
|
7sjf.1
|
7sjf.2
|
7sjg.1
|
7sjg.2
|
7sjh.1
|
7sjh.2
|
7sji.1
|
7sji.2
|
7t9c.1
|
7t9c.2
|
7t9d.1
|
7t9d.2
|
7t9e.1
|
7t9e.2
|
8dog.1
|
8dog.2
|
8doh.1
|
8doh.2
|
8doi.1
|
8doi.2
|
8doj.1
|
8doj.2
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme