SMTL ID : 6gxk.1 (1 other biounit)

Crystal structure of Aldo-Keto Reductase 1C3 (AKR1C3) complexed with inhibitor.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 30 residues within 4Å: Chain A: G.22, T.23, Y.24, D.50, Y.55, K.84, H.117, S.166, N.167, Q.190, Y.216, S.217, A.218, L.219, G.220, S.221, Q.222, L.236, A.253, L.268, A.269, K.270, S.271, Y.272, N.273, R.276, Q.279, N.280 Ligands: FFW.2, EDO.3 27 PLIP interactions: 27 interactions with chain A Hydrogen bonds: A:T.23, A:Y.24, A:D.50, A:Y.55, A:S.166, A:N.167, A:Q.190, A:S.217, A:S.217, A:L.219, A:S.221, A:Q.222, A:Q.222, A:Q.222, A:K.270, A:S.271, A:Y.272, A:Q.279, A:N.280 Water bridges: A:A.218, A:A.218, A:K.270, A:Q.279 Salt bridges: A:K.270, A:R.276 pi-Stacking: A:Y.216 pi-Cation interactions: A:R.276

1 x FFW: 4-[[1-(4-chlorophenyl)carbonyl-5-methoxy-2-methyl-indol-3-yl]methyl]-1,2,5-oxadiazol-3-one(Non-covalent)

FFW.2: 20 residues within 4Å: Chain A: Y.24, L.54, Y.55, W.86, H.117, M.120, N.167, Y.216, S.217, S.221, W.227, Y.305, F.306, S.308, Y.317, P.318, Y.319 Ligands: NAP.1, EDO.3, EDO.4 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.86, A:N.167, A:F.306, A:F.306, A:F.306, A:P.318 Hydrogen bonds: A:Y.55, A:S.217 Water bridges: A:S.221 pi-Stacking: A:Y.216

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 8 residues within 4Å: Chain A: Y.24, S.217, S.221, Q.222, D.224, W.227 Ligands: NAP.1, FFW.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.217, A:Q.222 Water bridges: A:S.221, A:S.221, A:Q.222, A:D.224 EDO.4: 6 residues within 4Å: Chain A: W.86, S.87, S.118, M.120, F.311 Ligands: FFW.2 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.87, A:S.118, A:M.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lolli, M.L. et al., Bioisosteres of Indomethacin as Inhibitors of Aldo-Keto Reductase 1C3. Acs Med.Chem.Lett. (2019)

Release Date

2019-05-08

Peptides

Aldo-keto reductase family 1 member C3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aldo-keto reductase family 1 member C3

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