SMTL ID : 6hco.1

Cryo-EM structure of the ABCG2 E211Q mutant bound to estrone 3-sulfate and 5D3-Fab

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: N.605 Chain C: T.30, S.31, F.54 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 4 residues within 4Å: Chain E: T.30, S.31, F.54 Chain F: N.605 No protein-ligand interaction detected (PLIP)

1 x FY5: estrone 3-sulfate(Non-covalent)

FY5.3: 11 residues within 4Å: Chain A: T.444, N.445, F.448, V.555, M.558 Chain F: T.444, F.448, T.551, I.552, V.555, M.558 12 PLIP interactions: 6 interactions with chain A, 6 interactions with chain F Hydrophobic interactions: A:F.448, A:F.448, A:F.448, A:F.448, A:V.555, F:F.448, F:F.448, F:F.448, F:F.448, F:V.555 Hydrogen bonds: A:N.445, F:T.444

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Manolaridis, I. et al., Cryo-EM structures of a human ABCG2 mutant trapped in ATP-bound and substrate-bound states. Nature (2018)

Release Date

2018-11-07

Peptides

ATP-binding cassette sub-family G member 2: AF
5D3-Fab light chain: BD
5D3-Fab heavy chain: CE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

F
B

B
C

D
E

C
D

E
F

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family G member 2

5D3-Fab light chain

5D3-Fab heavy chain

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