SMTL ID : 7nfd.1

Structure of mitoxantrone-bound ABCG2

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-mer

Ligands

2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: N.596, T.598 Chain C: T.30, S.31, F.54 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 5 residues within 4Å: Chain E: T.30, S.31, F.54 Chain F: N.596, T.598 No protein-ligand interaction detected (PLIP)

1 x MIX: 1,4-DIHYDROXY-5,8-BIS({2-[(2-HYDROXYETHYL)AMINO]ETHYL}AMINO)-9,10-ANTHRACENEDIONE(Non-covalent)

MIX.3: 13 residues within 4Å: Chain A: T.435, N.436, F.439, T.542, V.546, M.549 Chain F: F.432, T.435, N.436, F.439, T.542, V.546, M.549 7 PLIP interactions: 3 interactions with chain A, 4 interactions with chain F Hydrophobic interactions: A:V.546, F:F.439 Hydrogen bonds: A:N.436, F:T.435 pi-Stacking: A:F.439, F:F.439, F:F.439

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kowal, J. et al., Structural Basis of Drug Recognition by the Multidrug Transporter ABCG2. J.Mol.Biol. (2021)

Release Date

2021-04-21

Peptides

ATP-binding cassette sub-family G member 2: AF
5D3(Fab) light chain variable domain: BD
5D3(Fab) heavy chain variable domain: CE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

F
B

B
C

D
E

C
D

E
F

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family G member 2

5D3(Fab) light chain variable domain

5D3(Fab) heavy chain variable domain

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