SMTL ID : 6qu2.2 (3 other biounits)

Crystal structure of DYRK1A complexed with FC162 inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.140, R.176, S.177 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.177, A:S.177 Salt bridges: A:K.140 SO4.2: 2 residues within 4Å: Chain A: S.134, N.136 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.134, A:N.136 Water bridges: A:S.134 SO4.3: 4 residues within 4Å: Chain A: R.131, G.132, S.134, R.314 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.132, A:S.134 Salt bridges: A:R.131, A:R.314

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.4: 5 residues within 4Å: Chain A: D.38, K.51, W.60, M.116 Ligands: JHW.8 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.38, A:K.51 Water bridges: A:K.51

3 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.5: 5 residues within 4Å: Chain A: L.137, P.174, K.175, R.176, S.177 No protein-ligand interaction detected (PLIP) DMS.6: 3 residues within 4Å: Chain A: L.299, H.300, K.329 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.299, A:H.300 DMS.7: 3 residues within 4Å: Chain A: I.344, Q.345, Y.348 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.345

1 x JHW: 8-cyclopropyl-2-pyridin-3-yl-[1,3]thiazolo[5,4-f]quinazolin-9-one(Non-covalent)

JHW.8: 13 residues within 4Å: Chain A: I.41, F.46, A.62, K.64, E.115, M.116, L.117, S.118, Y.119, L.170, V.182, D.183 Ligands: PG4.4 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.41, A:F.46, A:A.62, A:L.117, A:L.170, A:V.182 Hydrogen bonds: A:L.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaikuad, A. et al., Crystal structure of DYRK1A complexed with FC162 inhibitor. To Be Published

Release Date

2020-03-18

Peptides

Dual specificity tyrosine-phosphorylation-regulated kinase 1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Dual specificity tyrosine-phosphorylation-regulated kinase 1A

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