SMTL ID : 6t6a.1 (3 other biounits)

Crystal structure of DYRK1A complexed with KuFal319 (compound 11)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

3 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.1: 3 residues within 4Å: Chain A: Q.77, H.103, M.105 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.77 PG4.2: 7 residues within 4Å: Chain A: F.72, Q.75, Y.195, Y.197, I.198, Q.199, S.200 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.200 Water bridges: A:K.165, A:Q.199 PG4.3: 4 residues within 4Å: Chain A: D.38, K.51, W.60, M.116 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.38, A:K.51

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: R.131, G.132, S.134, R.314 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.134 Water bridges: A:R.131 Salt bridges: A:R.131, A:R.314 SO4.5: 6 residues within 4Å: Chain A: R.334, T.342, R.343, I.344, Q.345, Y.348 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.334, A:Q.345 Water bridges: A:Q.345 SO4.6: 3 residues within 4Å: Chain A: E.57, K.101, R.102 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.57 Salt bridges: A:R.102

1 x MLW: 4-chloranyl-5~{H}-cyclohepta[b]indol-10-one(Non-covalent)

MLW.7: 11 residues within 4Å: Chain A: I.41, F.46, V.49, A.62, K.64, F.114, E.115, L.117, L.170, V.182, D.183 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.46, A:V.49, A:A.62, A:F.114, A:D.183 Hydrogen bonds: A:K.64, A:D.183 Halogen bonds: A:L.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lechner, C. et al., [ b ]-Annulated Halogen-Substituted Indoles as Potential DYRK1A Inhibitors. Molecules (2019)

Release Date

2019-12-04

Peptides

Dual specificity tyrosine-phosphorylation-regulated kinase 1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Dual specificity tyrosine-phosphorylation-regulated kinase 1A

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