SMTL ID : 6s1i.4 (3 other biounits)

Crystal Structure of DYRK1A with small molecule inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.140, R.176, S.177 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.177 Water bridges: A:A.178, A:A.178 Salt bridges: A:K.140 SO4.2: 2 residues within 4Å: Chain A: K.101, R.102 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.102

1 x KR8: ~{N}-methyl-~{N}-phenyl-4-pyrazolo[1,5-b]pyridazin-3-yl-pyrimidin-2-amine(Non-covalent)

KR8.3: 14 residues within 4Å: Chain A: I.41, F.46, V.49, A.62, K.64, V.98, F.114, E.115, M.116, L.117, S.118, L.170, V.182, D.183 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.46, A:V.49, A:V.49, A:V.98, A:F.114, A:L.170, A:V.182 Hydrogen bonds: A:L.117, A:D.183 Water bridges: A:K.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Henderson, S.H. et al., Mining Public Domain Data to Develop Selective DYRK1A Inhibitors. Acs Med.Chem.Lett. (2020)

Release Date

2019-06-26

Peptides

Dual specificity tyrosine-phosphorylation-regulated kinase 1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Dual specificity tyrosine-phosphorylation-regulated kinase 1A

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