SMTL ID : 6rct.2 (1 other biounit)

Crystal structure of CLK3 in complex with T3-CLK

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

monomer

Ligands

1 x JWN: 4-[2-methyl-1-(4-methylpiperazin-1-yl)-1-oxidanylidene-propan-2-yl]-~{N}-(6-pyridin-4-ylimidazo[1,2-a]pyridin-2-yl)benzamide(Non-covalent)

JWN.1: 14 residues within 4Å: Chain A: N.37, L.38, A.60, K.62, E.77, V.96, F.112, E.113, L.114, L.115, G.116, K.117, L.166, D.196 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.38, A:A.60, A:V.96, A:F.112, A:F.112, A:K.117, A:L.166 Hydrogen bonds: A:L.115, A:L.115, A:D.196

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: L.288, V.289, W.290, E.292 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.290, A:E.292, A:E.292 EDO.3: 4 residues within 4Å: Chain A: H.215, Q.251, T.252, H.253 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.251 EDO.4: 8 residues within 4Å: Chain A: L.81, I.84, D.88, N.91, C.95, V.96, L.97, M.98 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.91, A:M.98 EDO.5: 3 residues within 4Å: Chain A: Y.141, H.145, L.343 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaikuad, A. et al., Crystal structure of CLK3 in complex with TP003. To Be Published

Release Date

2019-05-01

Peptides

Dual specificity protein kinase CLK3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Dual specificity protein kinase CLK3

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