SMTL ID : 6ru6.2 (1 other biounit)

Crystal structure of Casein Kinase I delta (CK1d) in complex with monophosphorylated p63 PAD1P peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)

ACP.1: 14 residues within 4Å: Chain A: I.17, D.24, I.25, A.38, K.40, M.84, E.85, L.86, L.87, K.132, N.135, L.137, I.150, D.151 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.85, A:L.87, A:K.132, A:D.151 Water bridges: A:S.90 Salt bridges: A:K.40

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.180, Q.216, G.217 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.217 Salt bridges: A:R.180, A:K.226

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: P.89, M.138, G.139, G.144, W.292, N.293 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gebel, J. et al., p63 uses a switch-like mechanism to set the threshold for induction of apoptosis. Nat.Chem.Biol. (2020)

Release Date

2020-05-13

Peptides

Casein kinase I isoform delta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Casein kinase I isoform delta

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