SMTL ID : 6rxt.1

Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state A

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-2-1-1-1-1-1-1-1-2-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-1-mer
Ligands
1 x ZN: ZINC ION(Non-covalent)
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Cheng, J. et al., Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration. Mol.Cell (2019)
Release Date
2019-08-14
Peptides
Periodic tryptophan protein 2-like protein: A
Utp2: B
Utp3: C
Utp4: D
Utp6: E
Utp7: F
UTP10: G
U3 small nucleolar RNA-associated protein 11: H
Utp12: I
Utp13": J
Utp14: K
Utp15: L
Utp17: M
Utp18: N
Putative U3 snoRNP protein: O
Utp24: P
Utp30: Q
Nop1: RS
Putative nucleolar protein: T
Nop58: U
snu13: VW
Rrp9: X
RNA 3'-terminal phosphate cyclase-like protein: Y
Bms1: Z
Imp3: 0
Putative U3 small nucleolar ribonucleoprotein: 1
Putative U3 small nucleolar ribonucleoprotein protein: 2
Sof1: 3
Emg1: 45
KRR1 small subunit processome component: 6
Pre-rRNA-processing protein PNO1: 7
Kre33: 89
Fcf2: a
40S ribosomal protein S1: b
40S ribosomal protein s5-like protein: c
40S ribosomal protein S7: d
40S ribosomal protein s9-like protein: e
40S ribosomal protein S13-like protein: f
40S ribosomal protein S14-like protein: g
40S ribosomal protein S16-like protein: h
40S ribosomal protein S22-like protein: i
40S ribosomal protein s23-like protein: j
40S ribosomal protein S28-like protein: k
Faf1: l
Utp8: o
Utp5": pt
Noc4: q
Putative ribosomal protein: r
Enp1: s
Utp16: u
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
UA
B
UB
C
UC
D
UD
E
UF
F
UG
G
UJ
H
UK
I
UL
J
UM
K
UN
L
UO
M
UQ
N
UR
O
UU
P
UX
Q
UZ
R
CA
S
CB
T
CC
U
CD
V
CE
W
CF
X
CG
Y
CH
Z
CI
0
CJ
1
CK
2
CL
3
CM
4
CN
5
CO
6
CP
7
CQ
8
CR
9
CS
a
CT
b
Ca
c
Cc
d
Ce
e
Cg
f
Ch
g
Ci
h
Cj
i
Cm
j
Cn
k
Cp
l
CU
o
UH
p
UE
t
UI
q
US
r
Cl
s
CX
u
UP

Periodic tryptophan protein 2-like protein

Utp2

Utp3

Utp4

Utp6

Utp7

UTP10

U3 small nucleolar RNA-associated protein 11

Utp12

Utp13"

Utp14

Utp15

Utp17

Utp18

Putative U3 snoRNP protein

Utp24

Utp30

Nop1

Putative nucleolar protein

Nop58

snu13

Rrp9

RNA 3'-terminal phosphate cyclase-like protein

Bms1

Imp3

Putative U3 small nucleolar ribonucleoprotein

Putative U3 small nucleolar ribonucleoprotein protein

Sof1

Emg1

KRR1 small subunit processome component

Pre-rRNA-processing protein PNO1

Kre33

Toggle Identical (89)

Fcf2

40S ribosomal protein S1

40S ribosomal protein s5-like protein

40S ribosomal protein S7

40S ribosomal protein s9-like protein

40S ribosomal protein S13-like protein

40S ribosomal protein S14-like protein

40S ribosomal protein S16-like protein

40S ribosomal protein S22-like protein

40S ribosomal protein s23-like protein

40S ribosomal protein S28-like protein

Faf1

Utp8

Utp5"

Toggle Identical (pt)

Noc4

Putative ribosomal protein

Enp1

Utp16

Related Entries With Identical Sequence

5jpq.1 | 5oql.1 | 6rxu.1 | 6rxu.2 | 6rxu.3 | 6rxu.4 | 6rxu.5 | 6rxu.6 | 6rxu.7 | 6rxu.8 | 6rxu.9 | 6rxu.10 | 6rxu.11 | 6rxu.12 | 6rxu.13 | 6rxu.14 | 6rxu.15 | 6rxu.16 | 6rxu.17 | 6rxu.18 | 6rxu.19 | 6rxu.20 | 6rxu.21 | 6rxu.22 | 6rxu.23 | 6rxu.24 | 6rxu.25 | 6rxu.26 | 6rxu.27 | 6rxu.28  more...