SMTL ID : 6wdr.1

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.70 Å

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Rai, J. et al., An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7. Rna (2021)

Release Date

2020-09-30

Peptides

40S ribosomal protein S0-A: A
40S ribosomal protein S2: B
40S ribosomal protein S3: C
40S ribosomal protein S4-A: D
40S ribosomal protein S5: E
40S ribosomal protein S6-A: F
40S ribosomal protein S7-A: G
40S ribosomal protein S8-A: H
40S ribosomal protein S9-A: I
40S ribosomal protein S10-A: J
40S ribosomal protein S11-A: K
40S ribosomal protein S12: L
40S ribosomal protein S13: M
40S ribosomal protein S15: N
40S ribosomal protein S16-A: O
40S ribosomal protein S17-A: P
40S ribosomal protein S18-A: Q
40S ribosomal protein S19-A: R
40S ribosomal protein S20: S
40S ribosomal protein S21-A: T
40S ribosomal protein S22-A: U
40S ribosomal protein S23-A: V
40S ribosomal protein S24-A: W
40S ribosomal protein S25-A: X
40S ribosomal protein S27-A: Y
40S ribosomal protein S28-A: Z
40S ribosomal protein S29-A: 0
40S ribosomal protein S30-A: 1
Ubiquitin-40S ribosomal protein S31: 2
Guanine nucleotide-binding protein subunit beta-like protein: 3
Ribosome biogenesis protein TSR1: 4

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
D

D
E

E
F

F
G

G
H

H
I

I
J

J
K

K
L

L
M

M
N

N
P

O
Q

P
R

Q
S

R
T

S
U

T
V

U
W

V
X

W
Y

X
Z

Y
b

Z
c

0
d

1
e

2
f

3
g

4
k

40S ribosomal protein S0-A

40S ribosomal protein S2

40S ribosomal protein S3

40S ribosomal protein S4-A

40S ribosomal protein S5

40S ribosomal protein S6-A

40S ribosomal protein S7-A

40S ribosomal protein S8-A

40S ribosomal protein S9-A

40S ribosomal protein S10-A

40S ribosomal protein S11-A

40S ribosomal protein S12

40S ribosomal protein S13

40S ribosomal protein S15

40S ribosomal protein S16-A

40S ribosomal protein S17-A

40S ribosomal protein S18-A

40S ribosomal protein S19-A

40S ribosomal protein S20

40S ribosomal protein S21-A

40S ribosomal protein S22-A

40S ribosomal protein S23-A

40S ribosomal protein S24-A

40S ribosomal protein S25-A

40S ribosomal protein S27-A

40S ribosomal protein S28-A

40S ribosomal protein S29-A

40S ribosomal protein S30-A

Ubiquitin-40S ribosomal protein S31

Guanine nucleotide-binding protein subunit beta-like protein

Ribosome biogenesis protein TSR1

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