SMTL ID : 6zu9.1

Structure of a yeast ABCE1-bound 48S initiation complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x A- A- A- A- U- G- U- C: mRNA
4 x MG: MAGNESIUM ION
3 x ZN: ZINC ION
1 x ADP: ADENOSINE-5'-DIPHOSPHATE
1 x ATP: ADENOSINE-5'-TRIPHOSPHATE
2 x SF4: IRON/SULFUR CLUSTER
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Kratzat, H. et al., A structural inventory of native ribosomal ABCE1-43S pre-initiation complexes. Embo J. (2021)
Release Date
2020-10-28
Peptides
40S ribosomal protein S0-A: B
40S ribosomal protein S1-A: C
40S ribosomal protein S2: D
40S ribosomal protein S4-A: E
40S ribosomal protein S6-A: F
40S ribosomal protein S7-A: G
40S ribosomal protein S8-A: H
40S ribosomal protein S9-A: I
40S ribosomal protein S11-A: J
40S ribosomal protein S13: K
40S ribosomal protein S14-A: L
40S ribosomal protein S21-A: M
40S ribosomal protein S22-A: N
40S ribosomal protein S23-A: O
40S ribosomal protein S24-A: P
40S ribosomal protein S26-A: Q
40S ribosomal protein S27-A: R
40S ribosomal protein S30-A: S
40S ribosomal protein S15: T
40S ribosomal protein S3: U
Rps5p: V
40S ribosomal protein S10-A: W
40S ribosomal protein S12: X
40S ribosomal protein S16-A: Y
40S ribosomal protein S17-A: Z
40S ribosomal protein S18-A: 0
40S ribosomal protein S19-A: 1
40S ribosomal protein S20: 2
40S ribosomal protein S25-A: 3
40S ribosomal protein S29-A: 4
Ubiquitin-40S ribosomal protein S31: 5
Guanine nucleotide-binding protein subunit beta-like protein: 6
40S ribosomal protein S28-B: 7
Eukaryotic translation initiation factor 3 subunit I: 8
Eukaryotic translation initiation factor 3 subunit G: 9
Eukaryotic translation initiation factor 5: b
Eukaryotic translation initiation factor 3 subunit A: c
Eukaryotic translation initiation factor 3 subunit B: d
Eukaryotic translation initiation factor 3 subunit C: e
Eukaryotic translation initiation factor 1A: f
Translation initiation factor RLI1: g
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
B
P
C
Q
D
R
E
S
F
T
G
U
H
V
I
W
J
X
K
Y
L
Z
M
a
N
b
O
c
P
d
Q
e
R
f
S
g
T
E
U
B
V
C
W
D
X
F
Y
H
Z
I
0
J
1
K
2
L
3
M
4
N
5
O
6
h
7
i
8
l
9
r
b
m
c
o
d
p
e
q
f
A
g
k

40S ribosomal protein S0-A

40S ribosomal protein S1-A

40S ribosomal protein S2

40S ribosomal protein S4-A

40S ribosomal protein S6-A

40S ribosomal protein S7-A

40S ribosomal protein S8-A

40S ribosomal protein S9-A

40S ribosomal protein S11-A

40S ribosomal protein S13

40S ribosomal protein S14-A

40S ribosomal protein S21-A

40S ribosomal protein S22-A

40S ribosomal protein S23-A

40S ribosomal protein S24-A

40S ribosomal protein S26-A

40S ribosomal protein S27-A

40S ribosomal protein S30-A

40S ribosomal protein S15

40S ribosomal protein S3

Rps5p

40S ribosomal protein S10-A

40S ribosomal protein S12

40S ribosomal protein S16-A

40S ribosomal protein S17-A

40S ribosomal protein S18-A

40S ribosomal protein S19-A

40S ribosomal protein S20

40S ribosomal protein S25-A

40S ribosomal protein S29-A

Ubiquitin-40S ribosomal protein S31

Guanine nucleotide-binding protein subunit beta-like protein

40S ribosomal protein S28-B

Eukaryotic translation initiation factor 3 subunit I

Eukaryotic translation initiation factor 3 subunit G

Eukaryotic translation initiation factor 5

Eukaryotic translation initiation factor 3 subunit A

Eukaryotic translation initiation factor 3 subunit B

Eukaryotic translation initiation factor 3 subunit C

Eukaryotic translation initiation factor 1A

Translation initiation factor RLI1

Related Entries With Identical Sequence

3frx.1 | 3frx.2 | 3frx.3 | 3frx.4 | 3j16.1 | 3j6x.43 | 3j6x.44 | 3j6x.45 | 3j6x.46 | 3j6x.47 | 3j6x.48 | 3j6x.49 | 3j6x.50 | 3j6x.51 | 3j6x.52 | 3j6x.53 | 3j6x.55 | 3j6x.56 | 3j6x.59 | 3j6x.60 | 3j6x.61 | 3j6x.62 | 3j6x.63 | 3j6x.64 | 3j6x.65 | 3j6x.66 | 3j6x.67 | 3j6x.68 | 3j6x.69 | 3j6x.70  more...