SMTL ID : 6yjc.1

Crystal structure of p38alpha in complex with SR154

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x OSZ: 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-oxidanylidene-1-piperazin-1-yl-butan-2-yl]carbamoyl]phenyl]methyl]-1-phenyl-pyrazole-4-carboxamide(Non-covalent)

OSZ.1: 21 residues within 4Å: Chain A: Y.36, V.39, A.52, K.54, E.72, L.75, L.76, I.85, T.107, H.108, L.109, M.110, G.111, A.112, I.142, H.149, I.167, L.168, D.169, F.170, G.171 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:A.52, A:K.54, A:L.75, A:L.76, A:L.76, A:I.85, A:T.107, A:L.109, A:M.110, A:I.142, A:I.167, A:F.170, A:F.170 Hydrogen bonds: A:E.72, A:T.107, A:M.110, A:D.169

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: K.80, H.81, G.86, L.88 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.81, A:H.81, A:L.87 Water bridges: A:G.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rohm, S. et al., Selective targeting of the alpha C and DFG-out pocket in p38 MAPK. Eur.J.Med.Chem. (2020)

Release Date

2020-07-15

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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