SMTL ID : 7bdq.1

MAPK14 bound with SR300

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

monomer

Ligands

1 x TJZ: ~{N}-[(2~{S})-4-cyclohexyl-1-[[(3~{R})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]-4-[[(1-phenylpyrazolo[3,4-d]pyrimidin-4-yl)amino]methyl]benzamide(Non-covalent)

TJZ.1: 22 residues within 4Å: Chain A: V.39, A.52, K.54, R.68, R.71, E.72, L.75, L.76, V.84, I.85, T.107, H.108, L.109, M.110, I.142, H.149, I.167, L.168, D.169, F.170, G.171 Ligands: MES.4 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:A.52, A:L.75, A:L.76, A:V.84, A:I.85, A:T.107, A:L.109, A:M.110, A:I.142, A:I.167, A:F.170 Hydrogen bonds: A:R.71, A:E.72, A:E.72, A:T.107, A:T.107, A:M.110, A:D.169, A:D.169 Salt bridges: A:D.169 pi-Stacking: A:Y.36

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: H.49, R.50 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.49, A:R.50, A:R.50 EDO.3: 7 residues within 4Å: Chain A: D.146, I.148, R.150, Y.324, Q.326, E.329 Ligands: MES.4 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.148, A:R.150, A:R.150, A:Y.324, A:E.329, A:E.329

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.4: 6 residues within 4Å: Chain A: R.68, R.71, R.150, E.329 Ligands: TJZ.1, EDO.3 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.68, A:R.71, A:E.329

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rohm, S. et al., Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe. J.Med.Chem. (2021)

Release Date

2021-03-03

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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