SMTL ID : 6yyv.1

Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with manganese and 3-methyl-2-oxoglutarate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.77 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: H.350, R.359, H.396 Ligands: Q1Z.2 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.350, A:H.396, H2O.4, H2O.9

1 x Q1Z: (3~{R})-3-methyl-2-oxidanylidene-pentanedioic acid(Non-covalent)

Q1Z.2: 16 residues within 4Å: Chain A: W.296, S.339, M.341, V.347, H.350, R.359, H.361, I.373, W.382, F.390, H.396, V.398, R.406, I.408, I.410 Ligands: MN.1 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:W.296, A:V.347, A:V.398, A:I.410 Hydrogen bonds: A:W.296 Water bridges: A:R.359, A:R.359, A:R.359, A:R.359, A:D.392 Salt bridges: A:R.359, A:H.361, A:H.361, A:H.396, A:R.406

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brewitz, L. et al., Synthesis of 2-oxoglutarate derivatives and their evaluation as cosubstrates and inhibitors of human aspartate/asparagine-beta-hydroxylase. Chem Sci (2020)

Release Date

2021-03-17

Peptides

Aspartyl/asparaginyl beta-hydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Aspartyl/asparaginyl beta-hydroxylase

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