SMTL ID : 6zok.1

SARS-CoV-2-Nsp1-40S complex, focused on body

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
109 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
1 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Schubert, K. et al., SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation. Nat.Struct.Mol.Biol. (2020)
Release Date
2020-07-29
Peptides
40S ribosomal protein SA: B
40S ribosomal protein S3a: C
40S ribosomal protein S2: D
40S ribosomal protein S4, X isoform: E
40S ribosomal protein S6: F
40S ribosomal protein S7: G
40S ribosomal protein S8: H
40S ribosomal protein S9: I
40S ribosomal protein S11: J
40S ribosomal protein S13: K
40S ribosomal protein S14: L
40S ribosomal protein S17: M
40S ribosomal protein S21: N
40S ribosomal protein S15a: O
40S ribosomal protein S23: P
40S ribosomal protein S24: Q
40S ribosomal protein S26: R
40S ribosomal protein S27: S
40S ribosomal protein S30: T
Non-structural protein 1: U
60S ribosomal protein L41: V
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
B
A
C
B
D
C
E
E
F
G
G
H
H
I
I
J
J
L
K
N
L
O
M
R
N
V
O
W
P
X
Q
Y
R
a
S
b
T
e
U
j
V
h

40S ribosomal protein SA

40S ribosomal protein S3a

40S ribosomal protein S2

40S ribosomal protein S4, X isoform

40S ribosomal protein S6

40S ribosomal protein S7

40S ribosomal protein S8

40S ribosomal protein S9

40S ribosomal protein S11

40S ribosomal protein S13

40S ribosomal protein S14

40S ribosomal protein S17

40S ribosomal protein S21

40S ribosomal protein S15a

40S ribosomal protein S23

40S ribosomal protein S24

40S ribosomal protein S26

40S ribosomal protein S27

40S ribosomal protein S30

Non-structural protein 1

60S ribosomal protein L41

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