SMTL ID : 6zs4.1

Crystal structure of the fifth bromodomain of human protein polybromo-1 in complex with tert-butyl 4-[3-amino-6-(2-hydroxyphenyl)pyridazin-4-yl]piperazine-1-carboxylate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x QP8: tert-butyl 4-[3-amino-6-(2-hydroxyphenyl)pyridazin-4-yl]piperazine-1-carboxylate(Non-covalent)

QP8.1: 13 residues within 4Å: Chain A: I.41, F.42, L.45, P.46, L.51, Y.54, M.62, D.63, M.89, A.93, Y.96, N.97, I.103 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.45, A:L.45, A:D.63 Hydrogen bonds: A:Y.54, A:N.97, A:N.97 pi-Stacking: A:F.42

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: K.33, R.34 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.33, A:R.34, A:R.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wanior, M. et al., Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis. J.Med.Chem. (2020)

Release Date

2020-10-07

Peptides

Protein polybromo-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein polybromo-1

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