SMTL ID : 7b5s.1

Ubiquitin ligation to F-box protein substrates by SCF-RBR E3-E3 super-assembly: CUL1-RBX1-ARIH1 Ariadne. Transition State 1

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

5 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.276, C.281, C.297, C.299 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.276, B:C.281, B:C.297, B:C.299 ZN.2: 4 residues within 4Å: Chain B: C.304, C.307, H.312, C.317 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.304, B:C.307, B:H.312, B:C.317 ZN.3: 4 residues within 4Å: Chain C: C.42, C.45, H.80, C.83 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.42, C:C.45, C:H.80, C:C.83 ZN.4: 4 residues within 4Å: Chain C: C.75, H.77, C.94, D.97 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:C.75, C:H.77, C:C.94, C:D.97, C:D.97 ZN.5: 4 residues within 4Å: Chain C: C.53, C.56, C.68, H.82 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.53, C:C.56, C:C.68, C:H.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Horn-Ghetko, D. et al., Ubiquitin ligation to F-box protein targets by SCF-RBR E3-E3 super-assembly. Nature (2021)

Release Date

2021-02-10

Peptides

Cullin-1: A
E3 ubiquitin-protein ligase ARIH1: B
E3 ubiquitin-protein ligase RBX1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
H

C
R

Cullin-1

E3 ubiquitin-protein ligase ARIH1

E3 ubiquitin-protein ligase RBX1

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