SMTL ID : 7hn8.1

PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z1318110042

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.23 Å

Oligo State

monomer

Ligands

2 x 01: 4-[(but-2-yn-1-yl)(methyl)amino]-1lambda~6~-thiane-1,1-dione

01.1: 8 residues within 4Å: Chain A: Y.50, D.77, L.93, W.103, W.105, Q.116, N.168, F.171 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.103, A:W.105 Salt bridges: A:D.77 01.2: 6 residues within 4Å: Chain A: N.19, W.21, M.33, F.171, N.172, Y.173 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.21, A:F.171, A:Y.173

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 3 residues within 4Å: Chain A: F.91, S.92, N.97 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.92, A:N.97 Water bridges: A:S.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., PanDDA analysis group deposition. To Be Published

Release Date

2024-11-27

Peptides

E3 ubiquitin-protein ligase TRIM21: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase TRIM21

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