SMTL ID : 7syv.1

Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
2 x ZN: ZINC ION(Non-covalent)
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
1 x NA: SODIUM ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Brown, Z.P. et al., Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J. (2022)
Release Date
2022-07-20
Peptides
40S ribosomal protein S24: B
Eukaryotic translation initiation factor 1A, X-chromosomal: C
40S ribosomal protein S25: D
40S ribosomal protein SA: E
eS26: F
eS1: G
eS27: H
40S ribosomal protein S2: I
eS28: J
uS3: K
eS29: L
40S ribosomal protein S4: M
eS30: N
uS7: O
40S ribosomal protein S27a: P
eS6: Q
RACK1: R
40S ribosomal protein S7: S
eS8: U
60s ribosomal protein l41: V
uS4: W
Eukaryotic translation initiation factor 5B: X
eS10: Y
uS17: 0
eS12: 1
uS15: 2
uS11: 3
uS19: 4
uS9: 5
eS17: 6
uS13: 7
eS19: 8
uS10: 9
40S ribosomal protein S21: a
uS8: b
uS12: c
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
B
Z
C
A
D
a
E
B
F
b
G
C
H
c
I
D
J
d
K
E
L
e
M
F
N
f
O
G
P
g
Q
H
R
h
S
I
U
J
V
n
W
K
X
x
Y
L
0
M
1
N
2
O
3
P
4
Q
5
R
6
S
7
T
8
U
9
V
a
W
b
X
c
Y

40S ribosomal protein S24

Eukaryotic translation initiation factor 1A, X-chromosomal

40S ribosomal protein S25

40S ribosomal protein SA

eS26

eS1

eS27

40S ribosomal protein S2

eS28

uS3

eS29

40S ribosomal protein S4

eS30

uS7

40S ribosomal protein S27a

eS6

RACK1

40S ribosomal protein S7

eS8

60s ribosomal protein l41

uS4

Eukaryotic translation initiation factor 5B

eS10

uS17

eS12

uS15

uS11

uS19

uS9

eS17

uS13

eS19

uS10

40S ribosomal protein S21

uS8

uS12

Related Entries With Identical Sequence

3j7o.1 | 3j7p.40 | 3j7p.50 | 3j7p.51 | 3j7p.52 | 3j7p.54 | 3j7p.55 | 3j7p.57 | 3j7p.59 | 3j7p.63 | 3j7p.64 | 3j7p.67 | 3j7p.68 | 3j7p.73 | 3j7p.74 | 3j7p.78 | 3j7q.1 | 3j7r.39 | 3j7r.51 | 3j7r.52 | 3j7r.53 | 3j7r.55 | 3j7r.56 | 3j7r.58 | 3j7r.60 | 3j7r.64 | 3j7r.65 | 3j7r.68 | 3j7r.69 | 3j7r.74  more...