SMTL ID : 7uzg.1

Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-1-1-3-1-3-3-1-1-1-1-1-1-1-9-1-mer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 16 residues within 4Å: Chain C: Q.231, F.252, G.253, C.254, G.255, K.256, T.257, V.258, R.280, F.445, Q.522, N.523, G.524, Y.525 Chain F: R.400, K.403 18 PLIP interactions: 15 interactions with chain C, 3 interactions with chain F Hydrogen bonds: C:Q.231, C:A.251, C:G.253, C:C.254, C:G.255, C:K.256, C:T.257, C:T.257, C:V.258, C:Q.522, C:G.524, F:K.403 Salt bridges: C:K.256, C:R.280, C:R.280, F:R.400, F:R.400 pi-Stacking: C:F.445

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abbas, Y.M. et al., Structure of V-ATPase with NCOA7B. To Be Published

Release Date

2023-11-22

Peptides

ATPase H+-transporting V1 subunit A: ABC
V-type proton ATPase subunit B, brain isoform: DEF
V-type proton ATPase subunit C 1: G
ATPase H+-transporting V1 subunit D: H
V-type proton ATPase subunit E 1: IJK
V-type proton ATPase subunit F: L
V-type proton ATPase subunit G: MNO
Legionella pneumophila effector SidK: PQR
Nuclear receptor coactivator 7: S
V-type proton ATPase 116 kDa subunit a isoform 1: T
ATPase, H+ transporting, V0 subunit B (Predicted), isoform CRA_a: U
V-type proton ATPase subunit S1: V
V-type proton ATPase subunit: W
V-type proton ATPase subunit e 2: X
Ribonuclease K: Y
V-type proton ATPase 16 kDa proteolipid subunit: Z01234567
Renin receptor: 8

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
M

N
N

O
O

P
Q

Q
R

R
S

S
T

T
a

U
b

V
c

W
d

X
e

Y
f

Z
g

0
h

1
i

2
j

3
k

4
l

5
m

6
n

7
o

8
p

Membrane

We predict this structure to be a membrane protein.
Show / Hide

ATPase H+-transporting V1 subunit A

V-type proton ATPase subunit B, brain isoform

V-type proton ATPase subunit C 1

ATPase H+-transporting V1 subunit D

V-type proton ATPase subunit E 1

V-type proton ATPase subunit F

V-type proton ATPase subunit G

Legionella pneumophila effector SidK

Nuclear receptor coactivator 7

V-type proton ATPase 116 kDa subunit a isoform 1

ATPase, H+ transporting, V0 subunit B (Predicted), isoform CRA_a

V-type proton ATPase subunit S1

V-type proton ATPase subunit

V-type proton ATPase subunit e 2

Ribonuclease K

V-type proton ATPase 16 kDa proteolipid subunit

Renin receptor

Related Entries With Identical Sequence