SMTL ID : 8hmp.1

GPR52 with Gs and c17

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x EN6: N-(2-hydroxyethyl)-5-(hydroxymethyl)-3-methyl-1-[2-[[3-(trifluoromethyl)phenyl]methyl]-1-benzothiophen-7-yl]pyrazole-4-carboxamide(Non-covalent)

EN6.1: 20 residues within 4Å: Chain D: S.26, Y.34, D.38, V.39, C.40, T.44, I.47, C.94, F.117, Y.185, H.186, D.188, I.189, E.191, A.194, P.296, S.299, F.300, T.303, I.307 16 PLIP interactions: 16 interactions with chain D Hydrophobic interactions: D:Y.34, D:T.44, D:I.47, D:D.188, D:I.189, D:F.300, D:F.300, D:F.300, D:T.303, D:I.307 Hydrogen bonds: D:D.38, D:D.38, D:C.40, D:C.40, D:E.191 pi-Stacking: D:F.300

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, Y. et al., Allosteric coupling between G-protein binding and extracellular ligand binding sites in GPR52 revealed by 19 F-NMR and cryo-electron microscopy. MedComm (2020) (2023)

Release Date

2023-06-21

Peptides

Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1: A
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2: B
Nb35: C
G-protein coupled receptor 52: D
Guanine nucleotide-binding protein G(s) subunit alpha isoforms short: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
G

C
N

D
R

E
A

Membrane

We predict this structure to be a membrane protein.
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Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

Nb35

G-protein coupled receptor 52

Guanine nucleotide-binding protein G(s) subunit alpha isoforms short

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