- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- homo-dimer
- Ligands
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 3 residues within 4Å:- Chain A: N.151, F.162
- Ligands: GOL.7
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.151
GOL.7: 2 residues within 4Å:- Chain A: W.167
- Ligands: GOL.6
No protein-ligand interaction detected (PLIP)GOL.8: 2 residues within 4Å:- Chain A: G.288, I.289
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.211, A:K.211, A:I.289
GOL.21: 3 residues within 4Å:- Chain B: N.151, F.162
- Ligands: GOL.22
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.151
GOL.22: 2 residues within 4Å:- Chain B: W.167
- Ligands: GOL.21
No protein-ligand interaction detected (PLIP)GOL.23: 2 residues within 4Å:- Chain B: G.288, I.289
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:K.211, B:K.211, B:I.289
- 2 x ZN: ZINC ION(Non-covalent)
ZN.9: 5 residues within 4Å:- Chain A: H.199, D.201, H.279, W.296
- Ligands: VJF.10
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.199, A:D.201, A:D.201, A:H.279
ZN.24: 5 residues within 4Å:- Chain B: H.199, D.201, H.279, W.296
- Ligands: VJF.25
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:H.199, B:D.201, B:D.201, B:H.279
- 2 x VJF: 2-[(2~{Z})-3-oxidanyl-2-[3-(phenylsulfonylamino)propanoylimino]-1,3-thiazol-4-yl]ethanoic acid(Non-covalent)
VJF.10: 17 residues within 4Å:- Chain A: Y.145, T.183, S.184, L.186, L.188, T.196, H.199, D.201, E.202, Q.203, F.207, K.214, R.238, H.279, I.281, W.296
- Ligands: ZN.9
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:I.281, A:W.296
- Hydrogen bonds: A:Y.145, A:E.202, A:Q.203, A:R.238
- Salt bridges: A:K.214
- pi-Stacking: A:W.296
VJF.25: 17 residues within 4Å:- Chain B: Y.145, T.183, S.184, L.186, L.188, T.196, H.199, D.201, E.202, Q.203, F.207, K.214, R.238, H.279, I.281, W.296
- Ligands: ZN.24
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:I.281, B:W.296
- Hydrogen bonds: B:T.196, B:E.202, B:Q.203, B:R.238
- Salt bridges: B:K.214
- pi-Stacking: B:W.296
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Corner, T.P. et al., Structure-guided optimisation of N -hydroxythiazole-derived inhibitors of factor inhibiting hypoxia-inducible factor-alpha. Chem Sci (2023)
- Release Date
- 2023-12-13
- Peptides
- Hypoxia-inducible factor 1-alpha inhibitor: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- homo-dimer
- Ligands
- 20 x SO4: SULFATE ION(Non-functional Binders)
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
- 2 x VJF: 2-[(2~{Z})-3-oxidanyl-2-[3-(phenylsulfonylamino)propanoylimino]-1,3-thiazol-4-yl]ethanoic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Corner, T.P. et al., Structure-guided optimisation of N -hydroxythiazole-derived inhibitors of factor inhibiting hypoxia-inducible factor-alpha. Chem Sci (2023)
- Release Date
- 2023-12-13
- Peptides
- Hypoxia-inducible factor 1-alpha inhibitor: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A