SMTL ID : 8s18.1 (1 other biounit)

c-KIT kinase domain in complex with S116836

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x 01: 3-[2-[2-(cyclopropylamino)pyrimidin-5-yl]ethynyl]-~{N}-[3-imidazol-1-yl-5-(trifluoromethyl)phenyl]-4-methyl-benzamide

01.1: 23 residues within 4Å: Chain A: L.48, V.56, A.74, V.75, K.76, E.93, V.96, L.97, I.106, V.107, V.121, T.123, E.124, Y.125, C.126, G.129, L.176, H.183, L.192, I.201, C.202, D.203, F.204 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.56, A:A.74, A:K.76, A:E.93, A:L.97, A:V.121, A:T.123, A:L.192, A:D.203, A:F.204 Hydrogen bonds: A:E.93, A:C.126, A:C.126, A:D.203 Water bridges: A:E.93

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: K.79, P.80, S.81 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teuber, A. et al., c-KIT kinase domain in complex with S116836. To Be Published

Release Date

2025-09-03

Peptides

Mast/stem cell growth factor receptor Kit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mast/stem cell growth factor receptor Kit

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