SMTL ID : 8s1b.1 (1 other biounit)

c-KIT kinase domain in complex with IDRX-42 via soaking

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x K3R: ~{N}-[[4-(1-methylpyrazol-4-yl)phenyl]methyl]-6-[7-(3-pyrrolidin-1-ylpropoxy)imidazo[1,2-a]pyridin-3-yl]pyrimidin-4-amine(Non-covalent)

K3R.1: 21 residues within 4Å: Chain A: K.46, L.48, V.56, A.74, K.76, E.93, L.97, I.106, V.107, T.123, E.124, Y.125, C.126, C.127, G.129, L.176, L.192, I.201, C.202, D.203, F.204 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.48, A:L.48, A:V.56, A:A.74, A:L.97, A:T.123, A:D.203 Hydrogen bonds: A:T.123, A:T.123, A:C.126

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: Y.23 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teuber, A. et al., c-KIT kinase domain in complex with IDRX-42 via soaking. To Be Published

Release Date

2025-09-03

Peptides

Mast/stem cell growth factor receptor Kit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mast/stem cell growth factor receptor Kit

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