9bln.1 | SWISS-MODEL Template Library

SMTL ID : 9bln.1

The structure of human Pdcd4 bound to the 40S-eIF4A-eIF3-eIF1 complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

88 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

19 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)

1 x SPD: SPERMIDINE(Non-covalent)

3 x ZN: ZINC ION(Non-covalent)

1 x ACY: ACETIC ACID(Non-functional Binders)

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Brito Querido, J. et al., Human tumor suppressor protein Pdcd4 binds at the mRNA entry channel in the 40S small ribosomal subunit. Nat Commun (2024)

Release Date

2024-09-04

Peptides

Eukaryotic translation initiation factor 3 subunit I: A
Eukaryotic translation initiation factor 3 subunit B: B
Eukaryotic translation initiation factor 3 subunit K: C
Eukaryotic translation initiation factor 3 subunit F: D
Eukaryotic translation initiation factor 3 subunit L: E
Eukaryotic translation initiation factor 3 subunit M: F
Eukaryotic translation initiation factor 3 subunit H: G
Small ribosomal subunit protein eS32: H
Small ribosomal subunit protein uS17: J
Small ribosomal subunit protein eS4, X isoform: K
Small ribosomal subunit protein uS4: L
Small ribosomal subunit protein uS12: M
Small ribosomal subunit protein eS30: N
Small ribosomal subunit protein eS7: O
Small ribosomal subunit protein eS27: P
Small ribosomal subunit protein uS15: Q
Small ribosomal subunit protein uS8: R
Small ribosomal subunit protein eS21: S
Small ribosomal subunit protein uS5: T
Small ribosomal subunit protein eS17: U
Small ribosomal subunit protein uS2: V
Small ribosomal subunit protein eS1: W
40S ribosomal protein S14: X
Small ribosomal subunit protein eS26: Y
Small ribosomal subunit protein eS8: Z
Small ribosomal subunit protein eS6: 0
Small ribosomal subunit protein eS24: 1
Small ribosomal subunit protein uS7: 2
Eukaryotic translation initiation factor 1: 3
Small ribosomal subunit protein uS9: 4
Small ribosomal subunit protein uS3: 5
Small ribosomal subunit protein eS10: 6
Small ribosomal subunit protein uS19: 7
Receptor of activated protein C kinase 1: 8
Small ribosomal subunit protein eS19: 9
Small ribosomal subunit protein eS25: a
Small ribosomal subunit protein uS13: b
Small ribosomal subunit protein uS10: c
Small ribosomal subunit protein uS14: d
Ubiquitin-40S ribosomal protein S27a: e
Eukaryotic initiation factor 4A-I: f
Small ribosomal subunit protein eS12: g
Small ribosomal subunit protein eS28: h
Eukaryotic translation initiation factor 3 subunit G: i
Programmed cell death protein 4: j
Eukaryotic translation initiation factor 3 subunit A: k
Eukaryotic translation initiation factor 3 subunit E: l
Eukaryotic translation initiation factor 3 subunit D: m
Eukaryotic translation initiation factor 3 subunit C: n

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

B
U

C
3

D
4

E
5

F
6

G
8

H
9

J
B

K
C

L
D

M
E

N
F

O
G

P
H

Q
I

R
J

S
K

T
L

U
M

V
N

W
O

X
P

Y
Q

Z
R

0
S

1
T

2
V

3
W

4
Y

5
Z

6
a

7
b

8
c

9
d

a
e

b
f

c
h

d
i

e
k

f
l

g
m

h
n

i
o

j
p

k
u

l
v

m
x

n
y

Eukaryotic translation initiation factor 3 subunit I

Eukaryotic translation initiation factor 3 subunit B

Eukaryotic translation initiation factor 3 subunit K

Eukaryotic translation initiation factor 3 subunit F

Eukaryotic translation initiation factor 3 subunit L

Eukaryotic translation initiation factor 3 subunit M

Eukaryotic translation initiation factor 3 subunit H

Small ribosomal subunit protein eS32

Small ribosomal subunit protein uS17

Small ribosomal subunit protein eS4, X isoform

Small ribosomal subunit protein uS4

Small ribosomal subunit protein uS12

Small ribosomal subunit protein eS30

Small ribosomal subunit protein eS7

Small ribosomal subunit protein eS27

Small ribosomal subunit protein uS15

Small ribosomal subunit protein uS8

Small ribosomal subunit protein eS21

Small ribosomal subunit protein uS5

Small ribosomal subunit protein eS17

Small ribosomal subunit protein uS2

Small ribosomal subunit protein eS1

40S ribosomal protein S14

Small ribosomal subunit protein eS26

Small ribosomal subunit protein eS8

Small ribosomal subunit protein eS6

Small ribosomal subunit protein eS24

Small ribosomal subunit protein uS7

Eukaryotic translation initiation factor 1

Small ribosomal subunit protein uS9

Small ribosomal subunit protein uS3

Small ribosomal subunit protein eS10

Small ribosomal subunit protein uS19

Receptor of activated protein C kinase 1

Small ribosomal subunit protein eS19

Small ribosomal subunit protein eS25

Small ribosomal subunit protein uS13

Small ribosomal subunit protein uS10

Small ribosomal subunit protein uS14

Ubiquitin-40S ribosomal protein S27a

Eukaryotic initiation factor 4A-I

Small ribosomal subunit protein eS12

Small ribosomal subunit protein eS28

Eukaryotic translation initiation factor 3 subunit G

Programmed cell death protein 4

Eukaryotic translation initiation factor 3 subunit A

Eukaryotic translation initiation factor 3 subunit E

Eukaryotic translation initiation factor 3 subunit D

Eukaryotic translation initiation factor 3 subunit C

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