SMTL ID : 9brs.1

Intact V-ATPase State 2 in synaptophysin knock-out isolated synaptic vesicles

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-3-3-1-1-1-1-1-1-1-1-1-1-9-3-3-1-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Wang, C. et al., Structure and topography of the synaptic V-ATPase-synaptophysin complex. Nature (2024)

Release Date

2024-06-19

Peptides

V-type proton ATPase subunit E 1: ABC
V-type proton ATPase subunit G 2: DEF
V-type proton ATPase subunit C 1: G
V-type proton ATPase subunit H: H
V-type proton ATPase 116 kDa subunit a 1: I
V-type proton ATPase subunit e 2: J
Ribonuclease kappa: K
V-type proton ATPase subunit F: L
V-type proton ATPase subunit d 1: M
V-type proton ATPase subunit S1: N
Renin receptor cytoplasmic fragment: O
V-type proton ATPase 21 kDa proteolipid subunit c'': P
V-type proton ATPase 16 kDa proteolipid subunit c: QRSTUVWXY
V-type proton ATPase catalytic subunit A: Z01
V-type proton ATPase subunit B, brain isoform: 234
V-type proton ATPase subunit D: 5

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
8

B
9

C
Q

D
R

E
T

F
V

G
6

H
U

I
a

J
e

K
f

L
X

M
d

N
c

O
p

P
b

Q
g

R
h

S
i

T
j

U
k

V
l

W
m

X
n

Y
o

Z
1

0
2

1
0

2
4

3
5

4
3

5
7

Membrane

We predict this structure to be a membrane protein.
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V-type proton ATPase subunit E 1

V-type proton ATPase subunit G 2

V-type proton ATPase subunit C 1

V-type proton ATPase subunit H

V-type proton ATPase 116 kDa subunit a 1

V-type proton ATPase subunit e 2

Ribonuclease kappa

V-type proton ATPase subunit F

V-type proton ATPase subunit d 1

V-type proton ATPase subunit S1

Renin receptor cytoplasmic fragment

V-type proton ATPase 21 kDa proteolipid subunit c''

V-type proton ATPase 16 kDa proteolipid subunit c

V-type proton ATPase catalytic subunit A

V-type proton ATPase subunit B, brain isoform

V-type proton ATPase subunit D

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