A0A037Y4V1 (A0A037Y4V1_ECOLX) Escherichia coli
DNA oxidative demethylase AlkB UniProtKBInterProInteractive Modelling
216 aa; Sequence (Fasta) ;
2 identical sequences: Escherichia coli: P05050; Escherichia coli H386: A0A1X3JEY1
It is possible new templates exist for this target since these models were created.
Available Structures
37 Experimental Structures
Description | PDB ID | Oligo-state | Range | Ligands | ||
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Crystal Structure of Escherichia coli AlkB in complex with ssDNA containing a 1-methylguanine lesion | homo-2-mer | 2×CO; 2×AKG; | ||||
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Crystal Structure of AlkB in complex with Fe(II) and succinate | monomer | 1×FE2; 1×SIN; | ||||
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Crystal Structure of AlkB in complex with Mn(II) and 2-oxoglutarate | monomer | 1×AKG; 1×MN; | ||||
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Crystal structure of AlkB protein with cofactors bound to dsDNA containing m6A | monomer | 1×MN; 1×AKG; | ||||
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Crystal structure of AlkB D135I mutant protein with cofactors bound to dsDNA containing m6A/A | monomer | 1×MN; 1×AKG; | ||||
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Crystal structure of Escherichia coli AlkB with Co(II) and 2-OG | monomer | 1×CO; 1×AKG; | ||||
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Crystal structure of AlkB in complex with manganese and N-(4-((6-((carboxymethyl)carbamoyl)-5-hydro… | monomer | 1×UPW; 1×MN; | ||||
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Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase | monomer | 1×FE; 1×SIN; | ||||
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Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase | monomer | 1×MN; 1×AKG; 1×GOL; | ||||
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Crystal structure of AlkB D135I/E136H mutant protein with cofactors bound to dsDNA containing m6A/A | monomer | 1×MN; 1×AKG; | ||||
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Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase | monomer | 1×FE; 1×SIN; | ||||
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Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase | monomer | 1×FE; 1×SIN; | ||||
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X-ray structure of E coli AlkB bound to dsDNA containing 1meA/T with Mn and 2KG | monomer | 1×MN; 1×AKG; | ||||
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Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase | monomer | 1×MN; 1×AKG; 1×GOL; | ||||
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Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase | monomer | 1×FE; 1×SIN; | ||||
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Crystal Structure of AlkB in complex with 5-carboxy-8-hydroxyquinoline (IOX1) | monomer | 1×8XQ; 1×MN; 1×ACT; 1×DMS; | ||||
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Crystal Structure of AlkB T208A mutant protein in complex with Co(II), 2-oxoglutarate, and methylat… | monomer | 1×CO; 1×AKG; | ||||
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Crystal structure of AlkB E136L mutant protein with cofactors bound to dsDNA containing m6A/A | monomer | 1×MN; 1×AKG; 1×GOL; | ||||
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Complex structure of AlkB/rhein | monomer | 1×RHN; 1×MN; | ||||
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Crystal Structure of AlkB in complex with Fe(III) and N-Oxalyl-S-(3-nitrobenzyl)-L-cysteine | monomer | 1×FE; 1×EPE; 1×MD5; | ||||
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X-ray structure of E coli AlkB crosslinked to dsDNA in the active site | monomer | 1×MN; 1×AKG; | ||||
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Alpha-ketoglutarate-dependent dioxygenase AlkB in complex with Fe, AKG and methylated DNA under ana… | monomer | 1×AKG; 1×FE; 1×O5W; | ||||
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Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase | monomer | 1×MN; 1×AKG; | ||||
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X-ray structure of AlkB protein bound to dsDNA containing 1meA/A with cofactors | monomer | 1×MN; 1×AKG; | ||||
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Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase | monomer | 1×AKG; 1×MN; | ||||
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Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate and methylated trinucleotide T-meC… | monomer | 1×AKG; 1×MN; | ||||
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Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meC… | monomer | 1×AKG; 1×FE2; | ||||
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Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-me… | monomer | 1×FE2; 1×AKG; 1×SIN; | ||||
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Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate, and methylated trinucleotide T-me… | monomer | 1×MN; 1×AKG; | ||||
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Crystal Structure of AlkB in complex with Co(II), 2-oxoglutarate, and methylated trinucleotide T-me… | monomer | 1×CO; 1×AKG; | ||||
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Crystal Structure of AlkB in complex with Fe(II), succinate, and methylated trinucleotide T-meA-T | monomer | 1×FE2; 1×SIN; | ||||
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Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-me… | monomer | 1×FE2; 1×AKG; | ||||
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Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meA… | monomer | 1×AKG; 1×FE2; | ||||
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Crystal Structure of AlkB in complex with Fe(III) and N-Oxalyl-S-(2-napthalenemethyl)-L-cysteine | monomer | 1×FE; 1×MD3; 1×GOL; | ||||
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Crystal structure of AlkB in complex with Fe(III) and 2-(3-hydroxypicolinomido)acetic acid | monomer | 1×FE; 1×MD6; | ||||
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Alpha-ketoglutarate-dependent dioxygenase AlkB in complex with Fe and AKG after oxygen exposure usi… | monomer | 1×FE; 1×AKG; | ||||
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Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-me… | monomer | 1×FE2; 1×AKG; 1×SIN; | ||||
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1 SWISS-MODEL model
Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
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3khc.1.B | monomer | 0.93 | 1×DT; 1×CO; 1×AKG; | 99.54 | ||
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