P05050 (ALKB_ECOLI) Escherichia coli (strain K12)

Alpha-ketoglutarate-dependent dioxygenase AlkB UniProtKBInterProSTRINGSTRINGInteractive Modelling

216 aa; Sequence (Fasta) ; 13 identical sequences

Available Structures

37 Experimental Structures

DescriptionOligo-stateLigandsStructureRange
Crystal Structure of Escherichia coli AlkB in complex with ssDNA containing a 1-methylguanine lesionhomo-2-merCO;AKG;9-216
Assess
Crystal Structure of AlkB in complex with Fe(II) and succinatemonomerFE2;SIN;13-216
Assess
Crystal Structure of AlkB in complex with Mn(II) and 2-oxoglutaratemonomerAKG;MN;13-215
Assess
Crystal structure of AlkB protein with cofactors bound to dsDNA containing m6AmonomerMN;AKG;12-214
Assess
Crystal structure of AlkB D135I mutant protein with cofactors bound to dsDNA containing m6A/AmonomerMN;AKG;12-214
Assess
Crystal structure of Escherichia coli AlkB with Co(II) and 2-OGmonomerCO;AKG;12-214
Assess
Crystal structure of AlkB in complex with manganese and N-(4-((6-((carboxymethyl)carbamoyl)-5-hydro…monomerUPW;MN;14-215
Assess
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair DioxygenasemonomerFE;SIN;13-214
Assess
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair DioxygenasemonomerMN;AKG;GOL;13-214
Assess
Crystal structure of AlkB D135I/E136H mutant protein with cofactors bound to dsDNA containing m6A/AmonomerMN;AKG;13-214
Assess
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair DioxygenasemonomerFE;SIN;13-214
Assess
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair DioxygenasemonomerFE;SIN;13-214
Assess
X-ray structure of E coli AlkB bound to dsDNA containing 1meA/T with Mn and 2KGmonomerMN;AKG;13-214
Assess
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair DioxygenasemonomerMN;AKG;GOL;13-214
Assess
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair DioxygenasemonomerFE;SIN;14-215
Assess
Crystal Structure of AlkB in complex with 5-carboxy-8-hydroxyquinoline (IOX1)monomer8XQ;MN;ACT;DMS;14-214
Assess
Crystal Structure of AlkB T208A mutant protein in complex with Co(II), 2-oxoglutarate, and methylat…monomerCO;AKG;15-215
Assess
Crystal structure of AlkB E136L mutant protein with cofactors bound to dsDNA containing m6A/AmonomerMN;AKG;GOL;14-214
Assess
Complex structure of AlkB/rheinmonomerRHN;MN;14-214
Assess
X-ray structure of E coli AlkB crosslinked to dsDNA in the active sitemonomerMN;AKG;14-214
Assess
Crystal Structure of AlkB in complex with Fe(III) and N-Oxalyl-S-(3-nitrobenzyl)-L-cysteinemonomerFE;EPE;MD5;14-214
Assess
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair DioxygenasemonomerMN;AKG;14-214
Assess
Alpha-ketoglutarate-dependent dioxygenase AlkB in complex with Fe, AKG and methylated DNA under ana…monomerAKG;FE;O5W;15-215
Assess
X-ray structure of AlkB protein bound to dsDNA containing 1meA/A with cofactorsmonomerMN;AKG;13-213
Assess
Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair DioxygenasemonomerAKG;MN;14-214
Assess
Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate and methylated trinucleotide T-meC…monomerAKG;MN;15-214
Assess
Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meC…monomerAKG;FE2;15-214
Assess
Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-me…monomerFE2;AKG;SIN;15-214
Assess
Crystal Structure of AlkB in complex with Co(II), 2-oxoglutarate, and methylated trinucleotide T-me…monomerCO;AKG;15-214
Assess
Crystal Structure of AlkB in complex with Mn(II), 2-oxoglutarate, and methylated trinucleotide T-me…monomerMN;AKG;15-214
Assess
Crystal Structure of AlkB in complex with Fe(II), succinate, and methylated trinucleotide T-meA-TmonomerFE2;SIN;15-214
Assess
Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-me…monomerFE2;AKG;15-214
Assess
Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate and methylated trinucleotide T-meA…monomerAKG;FE2;15-213
Assess
Crystal Structure of AlkB in complex with Fe(III) and N-Oxalyl-S-(2-napthalenemethyl)-L-cysteinemonomerFE;MD3;GOL;15-213
Assess
Crystal structure of AlkB in complex with Fe(III) and 2-(3-hydroxypicolinomido)acetic acidmonomerFE;MD6;16-214
Assess
Alpha-ketoglutarate-dependent dioxygenase AlkB in complex with Fe and AKG after oxygen exposure usi…monomerFE;AKG;15-213
Assess
Crystal Structure of AlkB in complex with Fe(II), 2-oxoglutarate, and methylated trinucleotide T-me…monomerFE2;AKG;SIN;16-214
Assess

1 Homology model

Oligo-stateLigandsQMEANDisCoTemplateRangeSeq id (%)
monomerDT;CO;AKG;0.933khc.1.B9-215
99.54
Assess

Alignments