H0GKZ8 (H0GKZ8_SACCK) Saccharomyces cerevisiae x Saccharomyces kudriavzevii (strain VIN7)(Yeast)
Rco1p UniProtKBInterProInteractive Modelling
684 aa; Sequence (Fasta) ;
4 identical sequences: Saccharomyces cerevisiae: C8ZES7, Q04779, A0A8H4BXB0, B3LLW8
It is possible new templates exist for this target since these models were created.
Available Structures
20 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Ligands | ||
|---|---|---|---|---|---|---|
| Rpd3S histone deacetylase complex |
Heteromer P22579; P32561; Q04779; Q12432; | |||||
| Assess | ||||||
| Rpd3S bound to the nucleosome |
Heteromer A0A310TTQ1; A0A8H4BXB0; A0A8H4F719; A0A8J0U496; A0A8J1LTD2; P22579; P32561; Q6AZJ8; | 1×ZN; 1×CA; | ||||
| Assess | ||||||
| Rpd3S in complex with nucleosome with H3K36MLA modification, H3K9Q mutation and 187bp DNA |
Heteromer A0A310TTQ1; P02281; P22579; P32561; P62799; Q04779; Q12432; Q6AZJ8; | 1×ZN; | ||||
| Assess | ||||||
| Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class1 |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | 1×ZN; | ||||
| Assess | ||||||
| Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class3 |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | 1×ZN; | ||||
| Assess | ||||||
| Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class2 |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | 1×ZN; | ||||
| Assess | ||||||
| Rpd3S in complex with nucleosome with H3K36MLA modification and 167bp DNA |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | |||||
| Assess | ||||||
| Rpd3S in complex with 187bp nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | |||||
| Assess | ||||||
| Cryo-EM structure of the Rpd3S core complex |
Heteromer A0A310TTQ1; A0A8H4BXB0; A0A8H4F719; P22579; P32561; | 1×ZN; 1×CA; | ||||
| Assess | ||||||
| Cryo-EM structure of the histone deacetylase complex Rpd3S |
Heteromer P22579; P32561; P84233; Q04779; Q12432; | 7×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of the histone deacetylase complex Rpd3S in complex with di-nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | 7×ZN; | ||||
| Assess | ||||||
| Composite cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | 7×ZN; | ||||
| Assess | ||||||
| Rpd3S bound to an H3K36Cme3 modified nucleosome |
Heteromer P02281; P02302; P06897; P22579; P32561; P62799; Q04779; Q12432; | 5×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | 5×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in loose state |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | 5×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of Rpd3S in loose-state Rpd3S-NCP complex |
Heteromer P22579; P32561; Q04779; Q12432; | 5×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of Rpd3S in close-state Rpd3S-NCP complex |
Heteromer P22579; P32561; Q04779; Q12432; | 5×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in close state |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q04779; Q12432; | 5×ZN; | ||||
| Assess | ||||||
| Cryo-EM structure of Rpd3S complex |
Heteromer P22579; P32561; Q04779; Q12432; | 7×ZN; | ||||
| Assess | ||||||
| Crystal structure of Rco1-Eaf3 with peptide of histone H3 N-terminal |
Heteromer P61830; Q04779; Q12432; | 2×ZN; | ||||
| Assess | ||||||
2 SWISS-MODEL models
| Template | Oligo-state | QMEANDisCo | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 8kd5.1.O | monomer | 0.51 | 100.00 | |||
| Assess | ||||||
| 8hy0.1.N | monomer | 0.50 | 4×ZN; | 100.00 | ||
| Assess | ||||||