SMTL ID : 8w9e.1

Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 2

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-2-1-3-2-2-2-2-mer
Ligands
7 x ZN: ZINC ION(Non-covalent)
1 x K: POTASSIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wang, C. et al., Structures and dynamics of Rpd3S complex bound to nucleosome. Sci Adv (2024)
Release Date
2024-05-15
Peptides
Transcriptional regulatory protein SIN3: A
Transcriptional regulatory protein RCO1: BF
Histone deacetylase RPD3: C
Chromatin modification-related protein EAF3: DEQ
Histone H3.1: GK
Histone H4: HL
Histone H2A type 1-B/E: IM
Histone H2B type 1-K: JN
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
E
F
F
C
B
D
C
E
D
Q
G
G
a
K
e
H
b
L
f
I
c
M
g
J
d
N
h

Transcriptional regulatory protein SIN3

Transcriptional regulatory protein RCO1

Histone deacetylase RPD3

Chromatin modification-related protein EAF3

Histone H3.1

Histone H4

Histone H2A type 1-B/E

Histone H2B type 1-K

Toggle Identical (JN)

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