SMTL ID : 7yi4.1

Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in close state

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-2-2-2-2-2-2-mer
Ligands
5 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Guan, H. et al., Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S. Nature (2023)
Release Date
2023-06-14
Peptides
Transcriptional regulatory protein SIN3: A
Histone deacetylase RPD3: B
Chromatin modification-related protein EAF3: CN
Transcriptional regulatory protein RCO1: DE
Histone H4: FI
Histone H2A: GJ
Histone H2B 1.1: HK
Histone H3: OP
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
N
E
D
D
E
F
F
H
I
L
G
I
J
M
H
J
K
N
O
G
P
K

Transcriptional regulatory protein SIN3

Histone deacetylase RPD3

Chromatin modification-related protein EAF3

Transcriptional regulatory protein RCO1

Histone H4

Histone H2A

Toggle Identical (GJ)

Histone H2B 1.1

Toggle Identical (HK)

Histone H3

Related Entries With Identical Sequence

1kx3.1 | 1kx4.1 | 1kx5.1 | 1m18.1 | 1m19.1 | 1m1a.1 | 1p34.1 | 1p3a.1 | 1p3k.1 | 1p3l.1 | 1p3m.1 | 1s32.1 | 1zbb.1 | 1zla.1 | 2fj7.1 | 2io5.1 | 2nzd.1 | 3b6f.1 | 3b6g.1 | 3c1b.1 | 3c1c.1 | 3c9k.1 | 3c9k.2 | 3kuy.1 | 3kxb.1 | 3lel.1 | 3lel.2 | 3lja.1 | 3lz0.1 | 3lz1.1  more...