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Coordinates: PDB Format Compare
Method: ELECTRON MICROSCOPY
Oligo State: hetero-1-1-2-2-2-2-2-2-mer
Ligands: None
Links: RCSB PDBe PDBe-KB PDBj PDBsum CATH
Citation: Dong, S. et al., Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex. Cell Res. (2023)
Release Date: 2023-09-13
Peptides: Histone deacetylase RPD3: A
Transcriptional regulatory protein SIN3: B
Chromatin modification-related protein EAF3: CE
Transcriptional regulatory protein RCO1: DF
Histone H3: GK
Histone H4: HL
Histone H2A: IM
Histone H2B 1.1: JN
SMTL:PDB: SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
D
E
F
D
E
F
G
G
O
K
S
H
P
L
T
I
Q
M
U
J
R
N
V

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Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

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NGLPV2D

Histone deacetylase RPD3

Transcriptional regulatory protein SIN3

Chromatin modification-related protein EAF3

Transcriptional regulatory protein RCO1

Histone H3

Toggle Identical (GK)

Histone H4

Histone H2A

Toggle Identical (IM)

Histone H2B 1.1

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