Q04779 (RCO1_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Transcriptional regulatory protein RCO1 UniProtKBInterProSTRINGInteractive Modelling
684 aa; Sequence (Fasta) ;
3 identical sequences: Saccharomyces cerevisiae: C8ZES7, B3LLW8; Saccharomyces cerevisiae x Saccharomyces kudriavzevii: H0GKZ8
It is possible new templates exist for this target since these models were created.
Available Structures
25 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Rpd3S histone deacetylase complex |
Heteromer P22579; P32561; Q12432; | 100.0 | ||||
| Rpd3S bound to the nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 1×ZN; 1×CA; | |||
| Rpd3S in complex with nucleosome with H3K36MLA modification, H3K9Q mutation and 187bp DNA |
Heteromer A0A310TTQ1; P02281; P22579; P32561; P62799; Q12432; Q6AZJ8; | 100.0 | 1×ZN; | |||
| Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class1 |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 1×ZN; | |||
| Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class2 |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 1×ZN; | |||
| Rpd3S in complex with nucleosome with H3K36MLA modification and 187bp DNA, class3 |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 1×ZN; | |||
| Rpd3S in complex with nucleosome with H3K36MLA modification and 167bp DNA |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | ||||
| Rpd3S in complex with 187bp nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | ||||
| Cryo-EM structure of the Rpd3S core complex |
Heteromer P22579; P32561; P84233; Q12432; | 100.0 | 1×ZN; 1×CA; | |||
| Cryo-EM structure of the histone deacetylase complex Rpd3S in complex with di-nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 7×ZN; | |||
| Cryo-EM structure of the histone deacetylase complex Rpd3S |
Heteromer P22579; P32561; P84233; Q12432; | 100.0 | 7×ZN; | |||
| Composite cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 7×ZN; | |||
| Rpd3S bound to an H3K36Cme3 modified nucleosome |
Heteromer P02281; P02302; P06897; P22579; P32561; P62799; Q12432; | 100.0 | 5×ZN; | |||
| Cryo-EM structure of the histone deacetylase complex Rpd3S in complex with nucleosome |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 5×ZN; | |||
| Cryo-EM structure of the Rpd3S complex from budding yeast |
Heteromer P22579; P32561; Q12432; | 100.0 | 7×ZN; 2×K; | |||
| Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 2 |
Heteromer O60814; P04908; P22579; P32561; P62805; P68431; Q12432; | 100.0 | 7×ZN; 1×K; | |||
| Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 3 |
Heteromer O60814; P04908; P22579; P32561; P62805; P68431; Q12432; | 100.0 | 7×ZN; | |||
| Cryo-EM structure of the Rpd3S-nucleosome complex from budding yeast in State 1 |
Heteromer O60814; P04908; P22579; P32561; P62805; P68431; Q12432; | 100.0 | 7×ZN; 2×K; | |||
| Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in loose state |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 5×ZN; | |||
| Cryo-EM structure of Rpd3S in loose-state Rpd3S-NCP complex |
Heteromer P22579; P32561; Q12432; | 100.0 | 5×ZN; | |||
| Cryo-EM structure of Rpd3S in close-state Rpd3S-NCP complex |
Heteromer P22579; P32561; Q12432; | 100.0 | 5×ZN; | |||
| Cryo-EM structure of Rpd3S complex bound to H3K36me3 nucleosome in close state |
Heteromer P02281; P06897; P22579; P32561; P62799; P84233; Q12432; | 100.0 | 5×ZN; | |||
| Cryo-EM structure of Rpd3S complex |
Heteromer P22579; P32561; Q12432; | 100.0 | 7×ZN; | |||
| Crystal structure of Rco1-Eaf3 with peptide of histone H3 N-terminal |
Heteromer P61830; Q12432; | 100 | 2×ZN; | |||
| Eaf3 CHD domain bound to the nucleosome |
Heteromer P02281; P06897; P62799; P84233; Q12432; | 100 | ||||
2 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 8hxx.1.D | monomer | 0.52 | 4×ZN; | 100.00 | ||
| 8kd5.1.O | monomer | 0.51 | 100.00 | |||