Q6PI20 (H33_DANRE) Danio rerio (Zebrafish) (Brachydanio rerio)

Histone H3.3 UniProtKBInterProSTRINGInteractive Modelling

136 aa; Sequence (Fasta) 527 identical sequences

Sequence Features

Add
 32Interaction with zmynd11
 1-132Histone H2A/H2B/H3
IPR007125PF00125

Sequence Alignments

Experimental structures

DescriptionOligo-stateLigandsStructureRange
Crystal Structure of the heterotypic nucleosome containing human CENP-A and H3.3 Heteromer
P04908; P06899; P49450; P62805; P84243;
3wtp37-136
Assess
The crystal structure of the nucleosome containing H3.3 at 2.18 angstrom resolution Heteromer
P04908; P06899; P62805; P84243;
CL; 13×MN;5x7x37-135
Assess
Crystal structure of EBV tegument protein BNRF1 in complex with histone chaperone DAXX and histones… Heteromer
P62805; P84243; Q1HVJ0; Q9UER7;
5kdm38-136
Assess
Complex structure 1 of DAXX/H3.3(sub5)/H4 Heteromer
P62805; P84243; Q9UER7;
PO4;4h9n38-135
Assess
Complex structure 4 of DAXX(E225A)/H3.3(sub5)/H4 Heteromer
P62805; P84243; Q9UER7;
PO4;4h9q38-135
Assess
Complex structure 5 of DAXX(E225A)/H3.3(sub5,G90A)/H4 Heteromer
P62805; P84243; Q9UER7;
PO4;4h9r38-135
Assess
Complex structure 3 of DAXX/H3.3(sub5,G90A)/H4 Heteromer
P62805; P84243; Q9UER7;
PO4;4h9p38-135
Assess
The crystal structure of the heterotypic H2AZ/H2A nucleosome with H3.3. Heteromer
P04908; P06899; P0C0S5; P62805; P84243;
CL; 10×MN;5b3239-136
Assess
The human nucleosome structure containing the histone variant H3.3 Heteromer
P04908; P06899; P62805; P84243;
3av239-136
Assess
The crystal structure of the H2AZ nucleosome with H3.3. Heteromer
P06899; P0C0S5; P62805; P84243;
5b3339-136
Assess
The mouse nucleosome structure containing H2A, H2B type3-A, H3mm7, and H4 Heteromer
C0HKE1; P62806; P84244; Q9D2U9;
5xm139-136
Assess
RNA polymerase II elongation complex stalled at SHL(-2) of the nucleosome Heteromer
C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5r39-136
Assess
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… Heteromer
C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
10×ZN;MG;6ir939-136
Assess
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA Heteromer
C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5l39-136
Assess
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA, tilt c… Heteromer
C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5u39-136
Assess
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… Heteromer
C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
10×ZN;MG;6j4x39-136
Assess
RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome Heteromer
C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5p39-136
Assess
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome Heteromer
C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5t39-136
Assess
RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA (+1 pos… Heteromer
C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6inq39-136
Assess
RNA polymerase II elongation complex stalled at SHL(-6) of the nucleosome Heteromer
C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6a5o39-136
Assess
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-5) of the nucleoso… Heteromer
C4QZ45; C4QZQ7; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; F2QTN1; P04908; P06899; P62805; P84243;
10×ZN;MG;6j4w39-136
Assess
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… Heteromer
C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
10×ZN;MG;6j4y39-136
Assess
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… Heteromer
C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6j5039-136
Assess
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… Heteromer
C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
ZN;MG;6j4z39-136
Assess
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… Heteromer
C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243;
10×ZN;MG;6j5139-136
Assess
Complex structure 2 of DAXX/H3.3(sub5,G90M)/H4 Heteromer
P62805; P84243; Q9UER7;
10×PO4;4h9o39-135
Assess
The mouse nucleosome structure containing H2A, H2B type3-A, H3.3, and H4 Heteromer
C0HKE1; P62806; P84244; Q9D2U9;
5xm039-135
Assess
Human-D02 Nucleosome Core Particle with biotin-streptavidin label Heteromer
P0C0S8; P62805; P62807; P84243;
MN;6r0c40-136
Assess
PFV intasome - nucleosome strand transfer complex Heteromer
P0C0S8; P14350; P62805; P62807; P84243;
MG;6rny40-136
Assess
CryoEM Structure of cGAS Nucleosome complex Heteromer
P62805; P62807; P84243; Q8C6L5; Q93077;
ZN;7a0841-135
Assess
Structure of the variant histone H3.3-H4 heterodimer in complex with its chaperone DAXX Heteromer
P62805; P84243; Q9UER7;
PC4;4hga44-136
Assess
Structure of nucleosome-bound human BAF complex Heteromer
O14497; O96019; P02281; P06897; P51532; P60709; P62799; Q12824; Q6PI79; Q8TAQ2; Q92785; Q969G3; Q96GM5;
ZN;6ltj45-135
Assess
Complex structure 6 of DAXX/H3.3(sub7)/H4 Heteromer
P62805; P84243; Q9UER7;
PO4;4h9s46-134
Assess
Crystal structure of human TONSL and MCM2 HBDs binding to a histone H3-H4 tetramer Heteromer
P49736; P62805; P84243; Q96HA7;
MES;GOL;5ja458-135
Assess
Crystal structure of Human MCM2 HBD chaperoning a histone H3-H4 tetramer Heteromer
P49736; P62805; P84243;
PO4;5bnv59-136
Assess
Crystal structure of Human MCM2 HBD and ASF1b chaperoning a histone H3.3-H4 dimer Heteromer
P49736; P62805; P84243; Q9NVP2;
GOL;5bnx59-135
Assess
UBN1 peptide bound to H3.3/H4/Asf1 Heteromer
P32447; P62799; Q6PI79; Q9NPG3;
CL;MPD;4zbj62-134
Assess
Crystal structure of LSD2 with H3 Heteromer
P84243; Q8NB78;
FAD;ZN;4gu02-27
Assess
Crystal structure of LSD2-NPAC with H3 in space group P3221 Heteromer
P84243; Q49A26; Q8NB78;
FAD;IOD;GOL;ZN;4gus2-21
Assess
Crystal structure of LSD2-NPAC with H3 in space group P21 Heteromer
P84243; Q49A26; Q8NB78;
FAD;GOL;ZN;4gur2-21
Assess
Crystal Structure of Bovine DNMT1 RFTS domain in complex with H3K9me3 and Ubiquitin Heteromer
P0CG47; P84243; Q24K09;
FLC;ZN;6pzv3-20
Assess
Solution structure of the chromodomain of HP1a with the phosphorylated N-terminal tail complexed wi… Heteromer
P84244; Q61686;
2rvn2-18
Assess
Crystal structure of SETD2 bound to histone H3.3 K36I peptide Heteromer
P84243; Q9BYW2;
SAH;SCN;GOL;ZN;5jlb30-43
Assess
crystal structure of SESTD2 in complex with H3.3S31phK36M peptide Heteromer
P84243; Q9BYW2;
ZN;SAH;SCN;6j9j30-43
Assess
Crystal structure of SETD2 bound to histone H3.3 K36M peptide Heteromer
P84243; Q9BYW2;
ZN;SAH;SCN;5jjy30-43
Assess
Crystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha … Heteromer
P84243; Q8R5C8;
ZN;PO4;PEG;4n4i30-40
Assess
Complex structure of ATRX ADD bound to H3K9me3S10ph peptide Heteromer
P46100; P84243;
ZN;4w5a2-12
Assess
Monoclinic complex structure of ATRX ADD bound to histone H3K9me3 peptide Heteromer
P46100; P84243;
ZN;3ql92-11
Assess
Hexagonal complex structure of ATRX ADD bound to H3K9me3 peptide Heteromer
P46100; P84243;
ZN;K;3qla2-11
Assess
Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3K9me3 peptide Heteromer
P84243; Q9BZ95;
ZN;GOL;4gng2-11
Assess
Crystal structure of DNMT3A-DNMT3L in complex with histone H3 Heteromer
P84243; Q9UJW3; Q9Y6K1;
ZN;SAH;4u7t2-11
Assess
Structure of UHRF1 in complex with histone tail Heteromer
P84243; Q96T88;
ZN;3ask2-11
Assess
Crystal structure of the tandem tudor domain and plant homeodomain of UHRF1 with Histone H3K9me3 Heteromer
P84243; Q96T88;
ZN;4gy52-11
Assess
Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3 peptide 1-15 Heteromer
P84243; Q9BZ95;
ZN;4gnf2-10
Assess
CW-type zinc finger of MORC3 in complex with the amino terminus of histone H3 Heteromer
P84243; Q14149;
ZN;UNX;CL;4qq42-10
Assess
Polycomb chromodomain complexed with the histone H3 tail containing trimethyllysine 27. Heteromer
P26017; P84243;
1pdq21-29
Assess
Crystal structure of CARM1, sinefungin, and H3 peptide (R17) Heteromer
P84243; Q86X55;
SFG;GOL;SO4;5dx014-22
Assess
Crystal structure of AF9 YEATS bound to H3K9ac peptide Heteromer
P42568; P84243;
EDO;4tmp4-12
Assess
Crystal structure of CARM1, sinefungin, and methylated H3 peptide (R17) Heteromer
P84243; Q86X55;
SFG;GOL;SO4;5dwq14-22
Assess
Crystal structure of the MLL5 PHD finger in complex with H3K4me3 Heteromer
P84243; Q8IZD2;
ZN;4l582-8
Assess
Crystal structure of Brd4 bromodomain 1 with propionylated histone H3-K(prop)23 Heteromer
P84243; Q9ESU6;
EDO;3muk22-28
Assess
Complex structure of ATRX ADD domain bound to unmodified H3 1-15 peptide Heteromer
P46100; P84243;
ZN;3qlc2-8
Assess
Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3 peptide 1-7 Heteromer
P84243; Q9BZ95;
ZN;4gne2-7
Assess
CW-type zinc finger of ZCWPW2 in complex with the amino terminus of histone H3 Heteromer
P84243; Q504Y3;
ZN; 27×UNX;4o622-7
Assess
WDR5 in complex with unmodified H3K4 peptide Heteromer
P61964; Q6P823;
2h9m2-7
Assess
WDR5 in complex with monomethylated H3K4 peptide Heteromer
P61964; Q6P823;
2h9n2-6
Assess
Crystal structure of bromodomain 1 of mouse Brd4 in complex with histone H3-K(ac)14 Heteromer
P84243; Q9ESU6;
EDO;3jvk13-16
Assess
WDR5 in complex with trimethylated H3K4 peptide Heteromer
P61964; Q6P823;
2h9p2-5
Assess
Crystal structure of Brd4 bromodomain 1 with butyrylated histone H3-K(buty)14 Heteromer
P84243; Q9ESU6;
EDO;3mul14-15
Assess
Structural basis for histone code recognition by BRPF2-PHD1 fingermonomer ZN;2l432-16
Assess
Crystal structure of human BRPF1 PZP bound to histone H3 tailmonomer PR;ZN;6u042-13
Assess

Homology models

Oligo-stateQMEANTemplateRangeSeq id (%)Ligands
monomer -2.14 6ven.1.A2-136
94.81
Assess