Q6PI20 (H33_DANRE) Danio rerio (Zebrafish) (Brachydanio rerio)
Histone H3.3 UniProtKBInterProSTRINGInteractive Modelling
136 aa; Sequence (Fasta) 527 identical sequences
It is possible new templates exist for this target since these models were created.
Sequence Alignments
Experimental structures
| Description | Oligo-state | Ligands | Structure | Range |
|---|---|---|---|---|
| Crystal Structure of the heterotypic nucleosome containing human CENP-A and H3.3 |
Heteromer P04908; P06899; P49450; P62805; P84243; | 3wtp | ||
| Assess | ||||
| The crystal structure of the nucleosome containing H3.3 at 2.18 angstrom resolution |
Heteromer P04908; P06899; P62805; P84243; | 4×CL; 13×MN; | 5x7x | |
| Assess | ||||
| Crystal structure of EBV tegument protein BNRF1 in complex with histone chaperone DAXX and histones… |
Heteromer P62805; P84243; Q1HVJ0; Q9UER7; | 5kdm | ||
| Assess | ||||
| Complex structure 1 of DAXX/H3.3(sub5)/H4 |
Heteromer P62805; P84243; Q9UER7; | 9×PO4; | 4h9n | |
| Assess | ||||
| Complex structure 4 of DAXX(E225A)/H3.3(sub5)/H4 |
Heteromer P62805; P84243; Q9UER7; | 9×PO4; | 4h9q | |
| Assess | ||||
| Complex structure 5 of DAXX(E225A)/H3.3(sub5,G90A)/H4 |
Heteromer P62805; P84243; Q9UER7; | 6×PO4; | 4h9r | |
| Assess | ||||
| Complex structure 3 of DAXX/H3.3(sub5,G90A)/H4 |
Heteromer P62805; P84243; Q9UER7; | 7×PO4; | 4h9p | |
| Assess | ||||
| The crystal structure of the heterotypic H2AZ/H2A nucleosome with H3.3. |
Heteromer P04908; P06899; P0C0S5; P62805; P84243; | 4×CL; 10×MN; | 5b32 | |
| Assess | ||||
| The human nucleosome structure containing the histone variant H3.3 |
Heteromer P04908; P06899; P62805; P84243; | 3av2 | ||
| Assess | ||||
| The crystal structure of the H2AZ nucleosome with H3.3. |
Heteromer P06899; P0C0S5; P62805; P84243; | 5b33 | ||
| Assess | ||||
| The mouse nucleosome structure containing H2A, H2B type3-A, H3mm7, and H4 |
Heteromer C0HKE1; P62806; P84244; Q9D2U9; | 5xm1 | ||
| Assess | ||||
| RNA polymerase II elongation complex stalled at SHL(-2) of the nucleosome |
Heteromer C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 8×ZN; 1×MG; | 6a5r | |
| Assess | ||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | 6ir9 | |
| Assess | ||||
| RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA |
Heteromer C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 8×ZN; 1×MG; | 6a5l | |
| Assess | ||||
| RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA, tilt c… |
Heteromer C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 8×ZN; 1×MG; | 6a5u | |
| Assess | ||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | 6j4x | |
| Assess | ||||
| RNA polymerase II elongation complex stalled at SHL(-5) of the nucleosome |
Heteromer C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 8×ZN; 1×MG; | 6a5p | |
| Assess | ||||
| RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome |
Heteromer C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 8×ZN; 1×MG; | 6a5t | |
| Assess | ||||
| RNA polymerase II elongation complex stalled at SHL(-1) of the nucleosome, with foreign DNA (+1 pos… |
Heteromer C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 8×ZN; 1×MG; | 6inq | |
| Assess | ||||
| RNA polymerase II elongation complex stalled at SHL(-6) of the nucleosome |
Heteromer C4QZQ7; C4R009; C4R1V1; C4R273; C4R2U9; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 8×ZN; 1×MG; | 6a5o | |
| Assess | ||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-5) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; F2QTN1; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | 6j4w | |
| Assess | ||||
| RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleoso… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | 6j4y | |
| Assess | ||||
| RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… |
Heteromer C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 9×ZN; 1×MG; | 6j50 | |
| Assess | ||||
| RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… |
Heteromer C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 9×ZN; 1×MG; | 6j4z | |
| Assess | ||||
| RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the n… |
Heteromer C4QZ45; C4QZQ7; C4R009; C4R0E6; C4R1V1; C4R273; C4R2U9; C4R370; C4R3P8; C4R3Z5; C4R4Y0; C4R7L2; C4R9A1; F2QMI1; F2QPE6; P04908; P06899; P62805; P84243; | 10×ZN; 1×MG; | 6j51 | |
| Assess | ||||
| Complex structure 2 of DAXX/H3.3(sub5,G90M)/H4 |
Heteromer P62805; P84243; Q9UER7; | 10×PO4; | 4h9o | |
| Assess | ||||
| The mouse nucleosome structure containing H2A, H2B type3-A, H3.3, and H4 |
Heteromer C0HKE1; P62806; P84244; Q9D2U9; | 5xm0 | ||
| Assess | ||||
| Human-D02 Nucleosome Core Particle with biotin-streptavidin label |
Heteromer P0C0S8; P62805; P62807; P84243; | 1×MN; | 6r0c | |
| Assess | ||||
| PFV intasome - nucleosome strand transfer complex |
Heteromer P0C0S8; P14350; P62805; P62807; P84243; | 2×MG; | 6rny | |
| Assess | ||||
| CryoEM Structure of cGAS Nucleosome complex |
Heteromer P62805; P62807; P84243; Q8C6L5; Q93077; | 1×ZN; | 7a08 | |
| Assess | ||||
| Structure of the variant histone H3.3-H4 heterodimer in complex with its chaperone DAXX |
Heteromer P62805; P84243; Q9UER7; | 4×PC4; | 4hga | |
| Assess | ||||
| Structure of nucleosome-bound human BAF complex |
Heteromer O14497; O96019; P02281; P06897; P51532; P60709; P62799; Q12824; Q6PI79; Q8TAQ2; Q92785; Q969G3; Q96GM5; | 1×ZN; | 6ltj | |
| Assess | ||||
| Complex structure 6 of DAXX/H3.3(sub7)/H4 |
Heteromer P62805; P84243; Q9UER7; | 3×PO4; | 4h9s | |
| Assess | ||||
| Crystal structure of human TONSL and MCM2 HBDs binding to a histone H3-H4 tetramer |
Heteromer P49736; P62805; P84243; Q96HA7; | 2×MES; 4×GOL; | 5ja4 | |
| Assess | ||||
| Crystal structure of Human MCM2 HBD chaperoning a histone H3-H4 tetramer |
Heteromer P49736; P62805; P84243; | 3×PO4; | 5bnv | |
| Assess | ||||
| Crystal structure of Human MCM2 HBD and ASF1b chaperoning a histone H3.3-H4 dimer |
Heteromer P49736; P62805; P84243; Q9NVP2; | 1×GOL; | 5bnx | |
| Assess | ||||
| UBN1 peptide bound to H3.3/H4/Asf1 |
Heteromer P32447; P62799; Q6PI79; Q9NPG3; | 8×CL; 1×MPD; | 4zbj | |
| Assess | ||||
| Crystal structure of LSD2 with H3 |
Heteromer P84243; Q8NB78; | 2×FAD; 6×ZN; | 4gu0 | |
| Assess | ||||
| Crystal structure of LSD2-NPAC with H3 in space group P3221 |
Heteromer P84243; Q49A26; Q8NB78; | 1×FAD; 6×IOD; 2×GOL; 3×ZN; | 4gus | |
| Assess | ||||
| Crystal structure of LSD2-NPAC with H3 in space group P21 |
Heteromer P84243; Q49A26; Q8NB78; | 1×FAD; 1×GOL; 3×ZN; | 4gur | |
| Assess | ||||
| Crystal Structure of Bovine DNMT1 RFTS domain in complex with H3K9me3 and Ubiquitin |
Heteromer P0CG47; P84243; Q24K09; | 1×FLC; 1×ZN; | 6pzv | |
| Assess | ||||
| Solution structure of the chromodomain of HP1a with the phosphorylated N-terminal tail complexed wi… |
Heteromer P84244; Q61686; | 2rvn | ||
| Assess | ||||
| Crystal structure of SETD2 bound to histone H3.3 K36I peptide |
Heteromer P84243; Q9BYW2; | 1×SAH; 3×SCN; 2×GOL; 3×ZN; | 5jlb | |
| Assess | ||||
| crystal structure of SESTD2 in complex with H3.3S31phK36M peptide |
Heteromer P84243; Q9BYW2; | 3×ZN; 1×SAH; 4×SCN; | 6j9j | |
| Assess | ||||
| Crystal structure of SETD2 bound to histone H3.3 K36M peptide |
Heteromer P84243; Q9BYW2; | 3×ZN; 1×SAH; 5×SCN; | 5jjy | |
| Assess | ||||
| Crystal structure of the Bromo-PWWP of the mouse zinc finger MYND-type containing 11 isoform alpha … |
Heteromer P84243; Q8R5C8; | 1×ZN; 1×PO4; 1×PEG; | 4n4i | |
| Assess | ||||
| Complex structure of ATRX ADD bound to H3K9me3S10ph peptide |
Heteromer P46100; P84243; | 3×ZN; | 4w5a | |
| Assess | ||||
| Monoclinic complex structure of ATRX ADD bound to histone H3K9me3 peptide |
Heteromer P46100; P84243; | 3×ZN; | 3ql9 | |
| Assess | ||||
| Hexagonal complex structure of ATRX ADD bound to H3K9me3 peptide |
Heteromer P46100; P84243; | 3×ZN; 1×K; | 3qla | |
| Assess | ||||
| Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3K9me3 peptide |
Heteromer P84243; Q9BZ95; | 4×ZN; 3×GOL; | 4gng | |
| Assess | ||||
| Crystal structure of DNMT3A-DNMT3L in complex with histone H3 |
Heteromer P84243; Q9UJW3; Q9Y6K1; | 6×ZN; 2×SAH; | 4u7t | |
| Assess | ||||
| Structure of UHRF1 in complex with histone tail |
Heteromer P84243; Q96T88; | 3×ZN; | 3ask | |
| Assess | ||||
| Crystal structure of the tandem tudor domain and plant homeodomain of UHRF1 with Histone H3K9me3 |
Heteromer P84243; Q96T88; | 3×ZN; | 4gy5 | |
| Assess | ||||
| Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3 peptide 1-15 |
Heteromer P84243; Q9BZ95; | 4×ZN; | 4gnf | |
| Assess | ||||
| CW-type zinc finger of MORC3 in complex with the amino terminus of histone H3 |
Heteromer P84243; Q14149; | 3×ZN; 7×UNX; 2×CL; | 4qq4 | |
| Assess | ||||
| Polycomb chromodomain complexed with the histone H3 tail containing trimethyllysine 27. |
Heteromer P26017; P84243; | 1pdq | ||
| Assess | ||||
| Crystal structure of CARM1, sinefungin, and H3 peptide (R17) |
Heteromer P84243; Q86X55; | 2×SFG; 1×GOL; 2×SO4; | 5dx0 | |
| Assess | ||||
| Crystal structure of AF9 YEATS bound to H3K9ac peptide |
Heteromer P42568; P84243; | 1×EDO; | 4tmp | |
| Assess | ||||
| Crystal structure of CARM1, sinefungin, and methylated H3 peptide (R17) |
Heteromer P84243; Q86X55; | 2×SFG; 1×GOL; 1×SO4; | 5dwq | |
| Assess | ||||
| Crystal structure of the MLL5 PHD finger in complex with H3K4me3 |
Heteromer P84243; Q8IZD2; | 2×ZN; | 4l58 | |
| Assess | ||||
| Crystal structure of Brd4 bromodomain 1 with propionylated histone H3-K(prop)23 |
Heteromer P84243; Q9ESU6; | 1×EDO; | 3muk | |
| Assess | ||||
| Complex structure of ATRX ADD domain bound to unmodified H3 1-15 peptide |
Heteromer P46100; P84243; | 3×ZN; | 3qlc | |
| Assess | ||||
| Crystal Structure of NSD3 tandem PHD5-C5HCH domains complexed with H3 peptide 1-7 |
Heteromer P84243; Q9BZ95; | 4×ZN; | 4gne | |
| Assess | ||||
| CW-type zinc finger of ZCWPW2 in complex with the amino terminus of histone H3 |
Heteromer P84243; Q504Y3; | 3×ZN; 27×UNX; | 4o62 | |
| Assess | ||||
| WDR5 in complex with unmodified H3K4 peptide |
Heteromer P61964; Q6P823; | 2h9m | ||
| Assess | ||||
| WDR5 in complex with monomethylated H3K4 peptide |
Heteromer P61964; Q6P823; | 2h9n | ||
| Assess | ||||
| Crystal structure of bromodomain 1 of mouse Brd4 in complex with histone H3-K(ac)14 |
Heteromer P84243; Q9ESU6; | 1×EDO; | 3jvk | |
| Assess | ||||
| WDR5 in complex with trimethylated H3K4 peptide |
Heteromer P61964; Q6P823; | 2h9p | ||
| Assess | ||||
| Crystal structure of Brd4 bromodomain 1 with butyrylated histone H3-K(buty)14 |
Heteromer P84243; Q9ESU6; | 1×EDO; | 3mul | |
| Assess | ||||
| Structural basis for histone code recognition by BRPF2-PHD1 finger | monomer | 2×ZN; | 2l43 | |
| Assess | ||||
| Crystal structure of human BRPF1 PZP bound to histone H3 tail | monomer | 1×PR; 5×ZN; | 6u04 | |
| Assess | ||||
Homology models
| Oligo-state | QMEAN | Template | Range | Seq id (%) | Ligands |
|---|---|---|---|---|---|
| monomer | -2.14 | 6ven.1.A | 94.81 | ||
| Assess | |||||