SMTL ID : 1ii6.1

Crystal Structure of the Mitotic Kinesin Eg5 in Complex with Mg-ADP.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 6 residues within 4Å: Chain A: A.37, S.340, L.341 Chain B: Y.231, S.233, R.234 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:S.233, B:R.234, B:R.234, A:S.340 Water bridges: B:S.233 NO3.2: 8 residues within 4Å: Chain A: I.163, E.166, H.236, N.287, S.291, S.314, K.315, L.316 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.236, A:N.287, A:S.291, A:K.315, A:L.316 Water bridges: A:E.166

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 2 residues within 4Å: Chain A: T.112 Ligands: ADP.4 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.112, H2O.1, H2O.1, H2O.1, H2O.5 MG.5: 2 residues within 4Å: Chain B: T.112 Ligands: ADP.6 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:T.112, H2O.7, H2O.7, H2O.7, H2O.7

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.4: 11 residues within 4Å: Chain A: R.24, R.26, P.27, T.107, G.108, T.109, G.110, K.111, T.112, F.113 Ligands: MG.3 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:R.24, A:G.108, A:G.110, A:K.111, A:T.112, A:F.113 Water bridges: A:R.24, A:K.111, A:T.112, A:T.112, A:D.265 Salt bridges: A:K.111 pi-Stacking: A:F.113 ADP.6: 14 residues within 4Å: Chain A: K.34 Chain B: R.24, R.26, P.27, Q.106, T.107, G.108, T.109, G.110, K.111, T.112, F.113, E.118 Ligands: MG.5 18 PLIP interactions: 17 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:R.24, B:G.108, B:T.109, B:T.109, B:G.110, B:K.111, B:T.112, B:F.113, B:E.118, A:K.34 Water bridges: B:R.24, B:R.24, B:R.24, B:T.107, B:K.111, B:T.112 Salt bridges: B:K.111 pi-Stacking: B:F.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Turner, J. et al., Crystal structure of the mitotic spindle kinesin Eg5 reveals a novel conformation of the neck-linker. J.Biol.Chem. (2001)

Release Date

2001-07-18

Peptides

KINESIN-RELATED MOTOR PROTEIN Eg5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

KINESIN-RELATED MOTOR PROTEIN Eg5

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