SMTL ID : 1jyc.2 (1 other biounit)

CONCANAVALIN A/15-mer PEPTIDE COMPLEX

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-4-4-mer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: E.8, D.10, D.19, H.24, S.34 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.8, A:D.10, A:D.19, A:H.24 MN.3: 5 residues within 4Å: Chain B: E.8, D.10, D.19, H.24, S.34 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.8, B:D.10, B:D.19, B:H.24, H2O.4, H2O.4 MN.5: 5 residues within 4Å: Chain E: E.8, D.10, D.19, H.24, S.34 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:E.8, E:D.10, E:D.19, E:H.24 MN.7: 5 residues within 4Å: Chain F: E.8, D.10, D.19, H.24, S.34 6 PLIP interactions: 4 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:E.8, F:D.10, F:D.19, F:H.24, H2O.8, H2O.8

4 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: D.10, Y.12, N.14, D.19 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.10, A:D.10, A:Y.12, A:D.19 CA.4: 4 residues within 4Å: Chain B: D.10, Y.12, N.14, D.19 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.10, B:D.10, B:Y.12, B:D.19 CA.6: 4 residues within 4Å: Chain E: D.10, Y.12, N.14, D.19 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:D.10, E:D.10, E:Y.12, E:D.19 CA.8: 4 residues within 4Å: Chain F: D.10, Y.12, N.14, D.19 4 PLIP interactions: 4 interactions with chain F Metal complexes: F:D.10, F:D.10, F:Y.12, F:D.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jain, D. et al., Plasticity in Protein-Peptide Recognition: Crystal Structures of Two Different Peptides Bound to Concanavalin A. Biophys.J. (2001)

Release Date

2002-09-12

Peptides

Concanavalin-Br: ABEF
15-mer peptide: CDGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

E
C

F
D

C
R

D
S

G
R

H
S

Concanavalin-Br

15-mer peptide

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