SMTL ID : 1kzp.1

PROTEIN FARNESYLTRANSFERASE COMPLEXED WITH A FARNESYLATED K-RAS4B PEPTIDE PRODUCT

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain B: D.297, C.299, Y.361, H.362 Chain C: C.8 Ligands: FAR.4 5 PLIP interactions: 1 interactions with chain C, 4 interactions with chain B Metal complexes: C:C.8, B:D.297, B:D.297, B:C.299, B:H.362

2 x ACY: ACETIC ACID(Non-functional Binders)

ACY.2: 5 residues within 4Å: Chain B: Y.81, L.89, T.90, Y.93 Ligands: ACY.3 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:Y.81, B:Y.93 Hydrogen bonds: B:T.90 Water bridges: B:Q.88 ACY.3: 5 residues within 4Å: Chain B: Y.81, Y.93, R.358, D.359 Ligands: ACY.2 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:R.358 Hydrogen bonds: B:Y.93 Salt bridges: B:R.358

1 x FAR: FARNESYL(Non-covalent)

FAR.4: 17 residues within 4Å: Chain A: Y.166 Chain B: W.102, R.202, Y.205, C.206, H.248, G.250, C.254, D.297, C.299, Y.300, W.303, Y.361 Chain C: C.8, V.9, I.10 Ligands: ZN.1 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain C Hydrophobic interactions: B:W.102, B:W.102, B:Y.205, B:W.303, C:I.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Long, S.B. et al., Reaction path of protein farnesyltransferase at atomic resolution. Nature (2002)

Release Date

2002-10-16

Peptides

Protein Farnesyltransferase alpha subunit: A
Protein Farnesyltransferase beta subunit: B
Farnesylated K-Ras4B peptide product: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Protein Farnesyltransferase alpha subunit

Protein Farnesyltransferase beta subunit

Farnesylated K-Ras4B peptide product

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