SMTL ID : 1piv.4 (4 other biounits)

BINDING OF THE ANTIVIRAL DRUG WIN51711 TO THE SABIN STRAIN OF TYPE 3 POLIOVIRUS: STRUCTURAL COMPARISON WITH DRUG BINDING IN RHINOVIRUS 14

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x ILE- SER- GLU- VAL: POLIOVIRUS TYPE 3 (SUBUNIT VP1)(Non-covalent)

ILE-SER-GLU-VAL.1: 4 residues within 4Å: Chain D: A.2, Q.3, V.4, S.5 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:A.2, D:Q.3, D:V.4, D:V.4

1 x W71: 5-(7-(4-(4,5-DIHYDRO-2-OXAZOLYL)PHENOXY)HEPTYL)-3-METHYL ISOXAZOLE(Non-covalent)

W71.2: 17 residues within 4Å: Chain A: I.109, Y.111, F.129, F.133, F.135, I.156, Y.158, P.180, S.181, I.182, I.193, V.195, V.198, Y.204, F.237, L.240 Chain C: A.24 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.111, A:F.133, A:Y.158, A:Y.158, A:Y.158, A:I.193, A:V.195, A:V.195, A:F.237, A:F.237, A:F.237, A:L.240 pi-Stacking: A:Y.111

1 x MYR: MYRISTIC ACID(Covalent)

MYR.3: 3 residues within 4Å: Chain D: G.1, A.2, Y.31 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:A.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hiremath, C.N. et al., Binding of the antiviral drug WIN51711 to the sabin strain of type 3 poliovirus: structural comparison with drug binding in rhinovirus 14. Acta Crystallogr.,Sect.D (1995)

Release Date

1995-06-03

Peptides

POLIOVIRUS TYPE 3 (SUBUNIT VP1): A
POLIOVIRUS TYPE 3 (SUBUNIT VP2): B
POLIOVIRUS TYPE 3 (SUBUNIT VP3): C
POLIOVIRUS TYPE 3 (SUBUNIT VP4): D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

D
4

POLIOVIRUS TYPE 3 (SUBUNIT VP1)

POLIOVIRUS TYPE 3 (SUBUNIT VP2)

POLIOVIRUS TYPE 3 (SUBUNIT VP3)

POLIOVIRUS TYPE 3 (SUBUNIT VP4)

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