SMTL ID : 3epd.4 (3 other biounits)

CryoEM structure of poliovirus receptor bound to poliovirus type 3

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x ILE- SER- GLU- VAL: Poliovirus Type3 peptide(Non-covalent)

ILE-SER-GLU-VAL.1: 5 residues within 4Å: Chain D: A.2, Q.3, V.4, S.5, N.25 8 PLIP interactions: 8 interactions with chain D Hydrophobic interactions: D:A.2, D:V.4 Hydrogen bonds: D:A.2, D:Q.3, D:V.4, D:V.4, D:S.6, D:N.25

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.2: 13 residues within 4Å: Chain B: I.87, Y.89, F.107, F.111, Y.136, I.160, I.171, V.173, Y.182, S.183, H.184, M.210, F.215 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:I.87, B:Y.89, B:F.107, B:F.111, B:Y.136, B:Y.136, B:I.160, B:I.171, B:V.173, B:Y.182, B:F.215, B:F.215, B:F.215 Hydrogen bonds: B:Y.89, B:S.183, B:S.183

1 x MYR: MYRISTIC ACID(Covalent)

MYR.3: 4 residues within 4Å: Chain D: G.1, A.2, I.29, Y.31 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:I.29, D:Y.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, P. et al., Crystal structure of CD155 and electron microscopic studies of its complexes with polioviruses. Proc.Natl.Acad.Sci.USA (2008)

Release Date

2008-11-11

Peptides

Poliovirus receptor: A
protein VP1: B
protein VP2: C
protein VP4: D
protein VP3: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
R

B
1

C
2

D
4

E
3

Poliovirus receptor

protein VP1

protein VP2

protein VP4

protein VP3

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