SMTL ID : 1pvc.4 (4 other biounits)

REFINEMENT OF THE SABIN STRAIN OF TYPE 3 POLIOVIRUS AT 2.4 ANGSTROMS AND THE CRYSTAL STRUCTURES OF ITS VARIANTS AT 2.9 ANGSTROMS RESOLUTION

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x ILE- SER- GLU- VAL: POLIOVIRUS TYPE 3, SABIN STRAIN(Non-covalent)

ILE-SER-GLU-VAL.1: 5 residues within 4Å: Chain D: A.2, Q.3, V.4, S.5, N.25 8 PLIP interactions: 8 interactions with chain D Hydrophobic interactions: D:A.2, D:V.4 Hydrogen bonds: D:A.2, D:Q.3, D:V.4, D:V.4, D:S.6, D:N.25

1 x SPH: SPHINGOSINE(Non-covalent)

SPH.2: 13 residues within 4Å: Chain A: I.109, Y.111, F.129, F.133, Y.158, I.182, I.193, V.195, Y.204, S.205, H.206, M.232, F.237 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:I.109, A:Y.111, A:F.129, A:F.133, A:Y.158, A:Y.158, A:I.182, A:I.193, A:V.195, A:Y.204, A:F.237, A:F.237, A:F.237 Hydrogen bonds: A:Y.111, A:S.205, A:S.205 Water bridges: A:L.200, A:A.203

1 x MYR: MYRISTIC ACID(Covalent)

MYR.3: 4 residues within 4Å: Chain D: G.1, A.2, I.29, Y.31 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:I.29, D:Y.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Syed, R. et al., Refinement of the Sabin Strain of Type 3 Poliovirus at 2.4 Angstroms and the Crystal Structures of its Variants at 2.9 Angstroms Resolution. To be Published

Release Date

1995-09-15

Peptides

POLIOVIRUS TYPE 3, SABIN STRAIN: A
POLIOVIRUS TYPE 3, SABIN STRAIN: B
POLIOVIRUS TYPE 3, SABIN STRAIN: C
POLIOVIRUS TYPE 3, SABIN STRAIN: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

D
4

POLIOVIRUS TYPE 3, SABIN STRAIN

POLIOVIRUS TYPE 3, SABIN STRAIN

POLIOVIRUS TYPE 3, SABIN STRAIN

POLIOVIRUS TYPE 3, SABIN STRAIN

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