- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CU: COPPER (II) ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
NA.2: 8 residues within 4Å:- Chain A: R.47, D.438, M.439, F.444, Y.544, D.579, I.580, V.581
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.579, A:D.579, A:I.580
NA.8: 6 residues within 4Å:- Chain B: R.47, D.438, M.439, F.444, D.579, I.580
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:I.580, B:I.580
- 2 x R4A: BIS[1H,1'H-2,2'-BIPYRIDINATO(2-)-KAPPA~2~N~1~,N~1'~]{3-[4-(1,10-DIHYDRO-1,10-PHENANTHROLIN-4-YL-KAPPA~2~N~1~,N~10~)BUTOXY]-N,N-DIMETHYLANILINATO(2-)}RUTHENIUM(Non-covalent)
R4A.3: 27 residues within 4Å:- Chain A: E.100, F.103, A.133, P.134, L.135, W.166, Y.294, D.296, Y.300, Q.304, Y.305, A.306, N.307, I.326, R.334, T.376, I.377, G.378, N.379, Y.380, F.405
- Chain B: S.354, D.355, L.356, W.357, G.359, N.361
8 PLIP interactions:6 interactions with chain A, 2 interactions with chain B,- Hydrophobic interactions: A:E.100, A:A.133, A:L.135, A:W.166, A:Y.305, B:L.356, B:L.356
- pi-Stacking: A:F.103
R4A.9: 26 residues within 4Å:- Chain A: S.354, D.355, L.356, W.357, G.359, N.361
- Chain B: E.100, F.103, A.133, P.134, L.135, W.166, Y.294, Y.300, Q.304, Y.305, A.306, N.307, I.326, R.334, T.376, I.377, G.378, N.379, Y.380, F.405
8 PLIP interactions:6 interactions with chain B, 2 interactions with chain A,- Hydrophobic interactions: B:E.100, B:A.133, B:L.135, B:W.166, B:Y.305, A:L.356, A:L.356
- pi-Stacking: B:F.103
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 11 residues within 4Å:- Chain A: G.348, I.349, R.365
- Chain B: D.314, C.315, L.316, H.343, E.345, V.370, Y.385
- Ligands: GOL.14
8 PLIP interactions:6 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:L.316
- Water bridges: B:S.372, B:Y.385, B:Y.385, B:Y.385, A:I.349
- Salt bridges: B:H.343, A:R.365
SO4.10: 9 residues within 4Å:- Chain A: D.314, C.315, L.316, H.343, Y.385
- Chain B: G.348, I.349, R.365
- Ligands: GOL.6
8 PLIP interactions:6 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:L.316, B:I.349
- Water bridges: A:H.343, A:Y.385, A:K.399, A:K.399
- Salt bridges: A:H.343, B:R.365
- 7 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 6 residues within 4Å:- Chain A: D.442, G.443, F.444, T.445, N.497, E.499
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:F.444, A:T.445, A:T.445, A:N.497
GOL.6: 8 residues within 4Å:- Chain A: E.345, W.347, R.368, K.399
- Chain B: D.346, W.347, G.348
- Ligands: SO4.10
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:E.345, A:R.368, A:K.399, A:K.399
- Water bridges: A:H.343, A:Y.387, B:D.346
GOL.11: 15 residues within 4Å:- Chain B: R.530, R.531, A.533, P.551, T.552, G.553, F.555, V.556, H.559, S.560, G.561, G.562, A.563, G.564, P.566
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.531, B:T.552, B:S.560, B:A.563
- Water bridges: B:A.533
GOL.12: 7 residues within 4Å:- Chain B: L.125, V.157, D.159, H.168, V.195, P.196, A.197
No protein-ligand interaction detected (PLIP)GOL.13: 6 residues within 4Å:- Chain B: D.442, G.443, F.444, T.445, N.497, E.499
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:F.444, B:T.445, B:T.445, B:N.497
GOL.14: 9 residues within 4Å:- Chain A: D.346, W.347, G.348, R.365
- Chain B: E.345, W.347, R.368, K.399
- Ligands: SO4.4
6 PLIP interactions:4 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:E.345, B:R.368, B:K.399, B:K.399
- Water bridges: A:W.347, A:I.349
GOL.15: 9 residues within 4Å:- Chain A: V.602, T.604
- Chain B: W.347, N.366, Y.389, D.391, T.393, E.395, K.608
6 PLIP interactions:5 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:N.366, A:V.602
- Water bridges: B:D.391, B:D.391, B:T.393, B:K.608
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Langley, D.B. et al., Enantiomer-Specific Binding of Ruthenium(II) Molecular Wires by the Amine Oxidase of Arthrobacter Globiformis. J.Am.Chem.Soc. (2008)
- Release Date
- 2007-05-01
- Peptides
- PHENYLETHYLAMINE OXIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CU: COPPER (II) ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x R4A: BIS[1H,1'H-2,2'-BIPYRIDINATO(2-)-KAPPA~2~N~1~,N~1'~]{3-[4-(1,10-DIHYDRO-1,10-PHENANTHROLIN-4-YL-KAPPA~2~N~1~,N~10~)BUTOXY]-N,N-DIMETHYLANILINATO(2-)}RUTHENIUM(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 7 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Langley, D.B. et al., Enantiomer-Specific Binding of Ruthenium(II) Molecular Wires by the Amine Oxidase of Arthrobacter Globiformis. J.Am.Chem.Soc. (2008)
- Release Date
- 2007-05-01
- Peptides
- PHENYLETHYLAMINE OXIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B