SMTL ID : 2fik.1

Structure of a microbial glycosphingolipid bound to mouse CD1d

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.80 Å
Oligo State
hetero-1-1-mer
Ligands
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x GSL: (2S,3R)-3-HYDROXY-2-(TETRADECANOYLAMINO)OCTADECYL ALPHA-D-GALACTOPYRANOSIDURONIC ACID(Non-covalent)
1 x PLM: PALMITIC ACID(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wu, D. et al., Design of natural killer T cell activators: structure and function of a microbial glycosphingolipid bound to mouse CD1d. Proc.Natl.Acad.Sci.Usa (2006)
Release Date
2006-03-21
Peptides
T-cell surface glycoprotein CD1d1: A
B(2)-microglobulin: B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B