SMTL ID : 2jal.1 (1 other biounit)

Beta-glucosidase from Thermotoga maritima in complex with cyclophellitol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x YLL: (1R,2S,3S,4S,5R,6R)-6-(HYDROXYMETHYL)CYCLOHEXANE-1,2,3,4,5-PENTOL(Covalent)

YLL.1: 12 residues within 4Å: Chain A: Q.42, H.143, N.187, E.188, Y.317, W.346, E.373, W.420, E.427, W.428, F.436 Ligands: ACT.3 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:E.373 Hydrogen bonds: A:Q.42, A:Q.42, A:H.143, A:N.187, A:E.427 Water bridges: A:R.99, A:Y.317, A:N.425

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 3 residues within 4Å: Chain A: A.76, Y.432, Y.443 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.432, A:Y.443 Hydrogen bonds: A:Q.446 Water bridges: A:V.75 ACT.3: 4 residues within 4Å: Chain A: V.191, H.202, E.427 Ligands: YLL.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.317, A:E.427 Salt bridges: A:H.202

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gloster, T.M. et al., Structural Basis for Cyclophellitol Inhibition of a Beta-Glucosidase. Org.Biomol.Chem. (2007)

Release Date

2007-01-03

Peptides

BETA-GLUCOSIDASE A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-GLUCOSIDASE A

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