- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x 2XA: (2R)-2-AMINO-3-[(4-CHLOROPHENYL)-DIPHENYL-METHYL]SULFANYL-PROPANOIC ACID(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: T.112, S.232
- Ligands: ADP.3
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:T.112, H2O.2, H2O.2, H2O.5, H2O.5
MG.6: 2 residues within 4Å:- Chain B: T.112
- Ligands: ADP.7
5 PLIP interactions:1 interactions with chain B, 4 Ligand-Water interactions- Metal complexes: B:T.112, H2O.7, H2O.10, H2O.11, H2O.11
MG.11: 2 residues within 4Å:- Chain C: T.112
- Ligands: ADP.12
No protein-ligand interaction detected (PLIP)- 3 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.3: 13 residues within 4Å:- Chain A: R.24, R.26, P.27, Q.106, T.107, G.108, T.109, G.110, K.111, T.112, F.113, E.118
- Ligands: MG.2
18 PLIP interactions:18 interactions with chain A- Hydrogen bonds: A:R.24, A:G.108, A:T.109, A:G.110, A:K.111, A:T.112, A:F.113, A:E.118
- Water bridges: A:R.24, A:N.29, A:T.107, A:K.111, A:T.112, A:T.112, A:D.265
- Salt bridges: A:K.111
- pi-Stacking: A:F.113, A:F.113
ADP.7: 13 residues within 4Å:- Chain B: R.24, R.26, P.27, Q.106, T.107, G.108, T.109, G.110, K.111, T.112, F.113, E.118
- Ligands: MG.6
17 PLIP interactions:17 interactions with chain B- Hydrogen bonds: B:R.24, B:G.108, B:T.109, B:G.110, B:K.111, B:T.112, B:T.112, B:F.113, B:E.118
- Water bridges: B:R.24, B:T.107, B:K.111, B:K.111, B:K.111
- Salt bridges: B:K.111
- pi-Stacking: B:F.113, B:F.113
ADP.12: 13 residues within 4Å:- Chain C: R.24, R.26, P.27, Q.106, T.107, G.108, T.109, G.110, K.111, T.112, F.113, E.118
- Ligands: MG.11
19 PLIP interactions:19 interactions with chain C- Hydrogen bonds: C:R.24, C:G.108, C:T.109, C:T.109, C:G.110, C:K.111, C:T.112, C:T.112, C:F.113, C:E.118
- Water bridges: C:R.24, C:T.107, C:K.111, C:K.111, C:K.111, C:T.112
- Salt bridges: C:K.111
- pi-Stacking: C:F.113, C:F.113
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.8: 5 residues within 4Å:- Chain B: M.184, F.185, D.186, R.312, R.318
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:D.186, B:D.186
- Salt bridges: B:R.312, B:R.318
SO4.9: 5 residues within 4Å:- Chain B: V.41, E.42, C.43, G.73, A.74
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:V.41, B:E.42, B:C.43, B:A.74
SO4.13: 5 residues within 4Å:- Chain C: M.184, F.185, D.186, R.312, R.318
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:D.186, C:D.186
- Salt bridges: C:R.312, C:R.318
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kaan, H.Y.K. et al., Structure-Activity Relationship and Multidrug Resistance Study of New S-Trityl-L-Cysteine Derivatives as Inhibitors of Eg5. J.Med.Chem. (2011)
- Release Date
- 2011-03-30
- Peptides
- KINESIN-LIKE PROTEIN KIF11: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x 2XA: (2R)-2-AMINO-3-[(4-CHLOROPHENYL)-DIPHENYL-METHYL]SULFANYL-PROPANOIC ACID(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kaan, H.Y.K. et al., Structure-Activity Relationship and Multidrug Resistance Study of New S-Trityl-L-Cysteine Derivatives as Inhibitors of Eg5. J.Med.Chem. (2011)
- Release Date
- 2011-03-30
- Peptides
- KINESIN-LIKE PROTEIN KIF11: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C