SMTL ID : 2zno.1 (1 other biounit)

Human PPAR gamma ligand binding domain in complex with a synthetic agonist TIPP703

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x S44: (2S)-2-(4-propoxy-3-{[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]phenyl}carbonyl)amino]methyl}benzyl)butanoic acid(Non-covalent)

S44.1: 16 residues within 4Å: Chain A: L.65, R.90, I.91, F.92, C.95, Q.96, R.98, S.99, H.133, Y.137, I.151, S.152, M.158, M.174, H.259, Y.283 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.65, A:F.92, A:Y.137, A:I.151, A:I.151, A:I.151 Hydrogen bonds: A:C.95, A:S.99, A:Y.137, A:S.152, A:Y.283 Salt bridges: A:H.133 S44.2: 18 residues within 4Å: Chain B: L.65, R.90, I.91, F.92, G.94, C.95, Q.96, R.98, S.99, H.133, Y.137, L.140, I.151, S.152, M.158, F.173, M.174, H.259 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.65, B:F.92, B:Y.137, B:L.140, B:L.140, B:I.151, B:I.151, B:F.173 Hydrogen bonds: B:S.99, B:S.99, B:S.152 Salt bridges: B:H.133, B:H.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oyama, T. et al., Adaptability and selectivity of human peroxisome proliferator-activated receptor (PPAR) pan agonists revealed from crystal structures. Acta Crystallogr.,Sect.D (2009)

Release Date

2009-05-05

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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