SMTL ID : 3b3k.2 (1 other biounit)

Crystal structure of the complex between PPARgamma and the full agonist LT175

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

1 x LRG: (2S)-2-(biphenyl-4-yloxy)-3-phenylpropanoic acid(Non-covalent)

LRG.1: 17 residues within 4Å: Chain A: F.92, Q.93, C.95, Q.96, S.99, H.133, I.136, Y.137, L.140, F.173, M.174, H.259, L.263, I.266, M.273, L.279, Y.283 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.92, A:Q.96, A:I.136, A:Y.137, A:L.140, A:F.173, A:F.173, A:L.263, A:I.266 Hydrogen bonds: A:S.99, A:S.99, A:Y.283 Salt bridges: A:H.133, A:H.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montanari, R. et al., Crystal Structure of the Peroxisome Proliferator-Activated Receptor gamma (PPARgamma) Ligand Binding Domain Complexed with a Novel Partial Agonist: A New Region of the Hydrophobic Pocket Could Be Exploited for Drug Design. J.Med.Chem. (2008)

Release Date

2008-10-28

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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