SMTL ID : 3an4.2 (1 other biounit)

Human PPAR gamma ligand binding domain in complex with a gamma selective agonist MO4R

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

1 x M7R: (2R)-2-benzyl-3-(4-propoxy-3-{[({4-[(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]dec-1-yl]phenyl}carbonyl)amino]methyl}phenyl)propanoic acid(Non-covalent)

M7R.1: 23 residues within 4Å: Chain A: L.65, E.69, R.90, I.91, F.92, G.94, C.95, Q.96, R.98, S.99, H.133, I.136, Y.137, V.149, I.151, S.152, M.158, L.163, M.174, H.259, L.263, L.279, Y.283 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.65, A:I.91, A:I.91, A:F.92, A:F.92, A:Q.96, A:V.149, A:I.151, A:I.151, A:L.163, A:L.263, A:L.279 Hydrogen bonds: A:S.99, A:S.99, A:S.152, A:Y.283 Salt bridges: A:H.133, A:H.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ohashi, M. et al., Design, Synthesis, and Structural Analysis of Phenylpropanoic Acid-Type PPAR gamma-Selective Agonists: Discovery of Reversed Stereochemistry-Activity Relationship. J.Med.Chem. (2011)

Release Date

2011-07-27

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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