SMTL ID : 3vso.1 (1 other biounit)

Human PPAR gamma ligand binding domain in complex with a gamma selective agonist mekt21

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

1 x EK1: (2R)-2-benzyl-3-[4-propoxy-3-({[4-(pyrimidin-2-yl)benzoyl]amino}methyl)phenyl]propanoic acid(Non-covalent)

EK1.1: 19 residues within 4Å: Chain A: L.65, F.74, I.91, F.92, G.94, C.95, Q.96, R.98, S.99, H.133, I.136, Y.137, I.151, M.158, M.174, H.259, L.263, L.279, Y.283 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.74, A:F.92, A:Q.96, A:I.136, A:I.151, A:L.263, A:L.263, A:L.279, A:Y.283 Hydrogen bonds: A:S.99, A:S.99 Salt bridges: A:H.133, A:H.259 pi-Stacking: A:H.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ohashi, M. et al., Design and synthesis of a series of alpha-benzyl phenylpropanoic acid-type peroxisome proliferator-activated receptor (PPAR) gamma partial agonists with improved aqueous solubility. Bioorg.Med.Chem. (2013)

Release Date

2013-05-01

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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