- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.84 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 63 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.2: 6 residues within 4Å:- Chain A: Y.11, S.12, R.353, S.356, W.357, D.358
Ligand excluded by PLIPPO4.3: 3 residues within 4Å:- Chain A: T.63, G.64, Q.440
Ligand excluded by PLIPPO4.4: 4 residues within 4Å:- Chain A: K.79, W.228, R.277, H.306
Ligand excluded by PLIPPO4.5: 2 residues within 4Å:- Chain A: R.44, S.45
Ligand excluded by PLIPPO4.6: 3 residues within 4Å:- Chain A: R.44, S.465, Y.487
Ligand excluded by PLIPPO4.7: 5 residues within 4Å:- Chain A: Q.226, T.272, H.273, N.275, V.276
Ligand excluded by PLIPPO4.8: 3 residues within 4Å:- Chain A: F.75, H.328, H.374
Ligand excluded by PLIPPO4.9: 3 residues within 4Å:- Chain A: E.254, R.257
- Chain B: K.441
Ligand excluded by PLIPPO4.10: 3 residues within 4Å:- Chain A: R.277, V.305, H.306
Ligand excluded by PLIPPO4.11: 5 residues within 4Å:- Chain A: Y.11, W.348, E.349, Q.350, R.353
Ligand excluded by PLIPPO4.12: 2 residues within 4Å:- Chain A: H.290, K.293
Ligand excluded by PLIPPO4.13: 3 residues within 4Å:- Chain A: E.111, R.170, P.428
Ligand excluded by PLIPPO4.14: 2 residues within 4Å:- Chain A: R.329, L.330
Ligand excluded by PLIPPO4.15: 3 residues within 4Å:- Chain A: I.158, P.159, H.162
Ligand excluded by PLIPPO4.16: 6 residues within 4Å:- Chain A: G.193, K.194, S.242, G.243
- Chain D: T.407, K.408
Ligand excluded by PLIPPO4.17: 2 residues within 4Å:- Chain A: A.438, N.442
Ligand excluded by PLIPPO4.18: 2 residues within 4Å:- Chain A: A.1, R.2
Ligand excluded by PLIPPO4.19: 2 residues within 4Å:- Chain A: Q.207, R.211
Ligand excluded by PLIPPO4.20: 2 residues within 4Å:- Chain A: L.372, R.433
Ligand excluded by PLIPPO4.22: 7 residues within 4Å:- Chain A: S.242
- Chain B: Y.11, S.12, R.353, S.356, W.357, D.358
Ligand excluded by PLIPPO4.23: 4 residues within 4Å:- Chain B: G.193, K.194, S.242, G.243
Ligand excluded by PLIPPO4.24: 4 residues within 4Å:- Chain B: K.79, W.228, R.277, H.306
Ligand excluded by PLIPPO4.25: 2 residues within 4Å:- Chain B: R.44, S.45
Ligand excluded by PLIPPO4.26: 5 residues within 4Å:- Chain B: Q.226, T.272, H.273, N.275, V.276
Ligand excluded by PLIPPO4.27: 3 residues within 4Å:- Chain B: I.158, P.159, H.162
Ligand excluded by PLIPPO4.28: 3 residues within 4Å:- Chain B: R.44, S.465, Y.487
Ligand excluded by PLIPPO4.29: 2 residues within 4Å:- Chain B: E.254, R.257
Ligand excluded by PLIPPO4.30: 3 residues within 4Å:- Chain B: A.1, R.2, S.25
Ligand excluded by PLIPPO4.31: 2 residues within 4Å:- Chain B: H.290, K.293
Ligand excluded by PLIPPO4.32: 3 residues within 4Å:- Chain B: R.277, V.305, H.306
Ligand excluded by PLIPPO4.33: 3 residues within 4Å:- Chain B: T.187, K.198, G.199
Ligand excluded by PLIPPO4.34: 2 residues within 4Å:- Chain B: Q.207, R.211
Ligand excluded by PLIPPO4.36: 6 residues within 4Å:- Chain C: Y.11, S.12, R.353, S.356, W.357, D.358
Ligand excluded by PLIPPO4.37: 3 residues within 4Å:- Chain C: T.63, G.64, Q.440
Ligand excluded by PLIPPO4.38: 2 residues within 4Å:- Chain C: R.44, S.45
Ligand excluded by PLIPPO4.39: 4 residues within 4Å:- Chain C: K.79, W.228, R.277, H.306
Ligand excluded by PLIPPO4.40: 5 residues within 4Å:- Chain C: Q.226, T.272, H.273, N.275, V.276
Ligand excluded by PLIPPO4.41: 4 residues within 4Å:- Chain C: Y.11, E.349, Q.350, R.353
Ligand excluded by PLIPPO4.42: 3 residues within 4Å:- Chain C: R.44, S.465, Y.487
Ligand excluded by PLIPPO4.43: 2 residues within 4Å:- Chain C: R.329, L.330
Ligand excluded by PLIPPO4.44: 2 residues within 4Å:- Chain C: E.254, R.257
Ligand excluded by PLIPPO4.45: 3 residues within 4Å:- Chain C: F.75, H.328, H.374
Ligand excluded by PLIPPO4.46: 2 residues within 4Å:- Chain C: R.277, H.306
Ligand excluded by PLIPPO4.47: 2 residues within 4Å:- Chain C: H.290, K.293
Ligand excluded by PLIPPO4.48: 3 residues within 4Å:- Chain C: E.111, R.170, P.428
Ligand excluded by PLIPPO4.49: 3 residues within 4Å:- Chain C: I.158, P.159, H.162
Ligand excluded by PLIPPO4.50: 2 residues within 4Å:- Chain C: A.1, R.2
Ligand excluded by PLIPPO4.51: 5 residues within 4Å:- Chain B: T.407
- Chain C: G.193, K.194, S.242, G.243
Ligand excluded by PLIPPO4.52: 4 residues within 4Å:- Chain C: R.285, P.319, A.320, T.369
Ligand excluded by PLIPPO4.54: 7 residues within 4Å:- Chain C: S.242
- Chain D: Y.11, S.12, R.353, S.356, W.357, D.358
Ligand excluded by PLIPPO4.55: 4 residues within 4Å:- Chain D: G.193, K.194, S.242, G.243
Ligand excluded by PLIPPO4.56: 4 residues within 4Å:- Chain D: K.79, W.228, R.277, H.306
Ligand excluded by PLIPPO4.57: 5 residues within 4Å:- Chain D: Q.226, T.272, H.273, N.275, V.276
Ligand excluded by PLIPPO4.58: 2 residues within 4Å:- Chain D: R.44, S.45
Ligand excluded by PLIPPO4.59: 3 residues within 4Å:- Chain D: R.44, S.465, Y.487
Ligand excluded by PLIPPO4.60: 3 residues within 4Å:- Chain D: R.277, V.305, H.306
Ligand excluded by PLIPPO4.61: 2 residues within 4Å:- Chain D: H.290, K.293
Ligand excluded by PLIPPO4.62: 3 residues within 4Å:- Chain D: I.158, P.159, H.162
Ligand excluded by PLIPPO4.63: 2 residues within 4Å:- Chain D: E.254, R.257
Ligand excluded by PLIPPO4.64: 2 residues within 4Å:- Chain D: Q.207, R.211
Ligand excluded by PLIPPO4.65: 3 residues within 4Å:- Chain D: A.438, N.442, L.444
Ligand excluded by PLIPPO4.66: 4 residues within 4Å:- Chain D: F.331, P.332, N.333, T.334
Ligand excluded by PLIPPO4.67: 3 residues within 4Å:- Chain D: A.1, R.2, S.25
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lieberman, R.L. et al., Effects of pH and iminosugar pharmacological chaperones on lysosomal glycosidase structure and stability. Biochemistry (2009)
- Release Date
- 2009-05-05
- Peptides
- Glucosylceramidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
SMTL ID : 3gxi.1 (3 other biounits)
Crystal structure of acid-beta-glucosidase at pH 5.5
Glucosylceramidase
Toggle Identical (ABCD)Related Entries With Identical Sequence
1ogs.1 | 1ogs.2 | 1y7v.1 | 1y7v.2 | 1y7v.3 | 1y7v.4 | 1y7v.5 | 1y7v.6 | 2f61.1 | 2f61.2 | 2j25.1 | 2j25.2 | 2nsx.1 | 2nsx.2 | 2nsx.3 | 2nsx.4 | 2nsx.5 | 2nsx.6 | 2nsx.7 | 2nsx.8 | 2nsx.9 | 2nt0.1 | 2nt0.2 | 2nt0.3 | 2nt0.4 | 2nt1.1 | 2nt1.2 | 2nt1.3 | 2nt1.4 | 2nt1.5 more...less...3gxd.1 | 3gxf.1 | 3gxf.2 | 3gxi.2 | 3gxi.3 | 3gxi.4 | 3gxm.1 | 3gxm.2 | 3gxm.3 | 3gxm.4 | 3rik.1 | 3rik.2 | 3ril.1 | 3ril.2 | 6moz.1 | 6moz.2 | 6q1n.1 | 6q1n.2 | 6q1p.1 | 6q1p.2 | 6q1p.3 | 6q6k.1 | 6q6l.1 | 6q6n.1 | 6tjj.1 | 6tjj.2 | 6ytp.1 | 6ytp.2 | 6yut.1 | 6yut.2 | 6yv3.1 | 6yv3.2 | 6z39.1 | 8p3e.1 | 8p41.1 | 8p41.2